Protein–RNA interactions for Protein: A0A0B4J1R7

BORCS7-ASMT, BORCS7-ASMT readthrough (NMD candidate), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BORCS7-ASMTA0A0B4J1R7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.34■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.34■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.33■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
BORCS7-ASMTA0A0B4J1R7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.33■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.33■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 AC126177.7-201ENST00000547904 679 ntBASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.31■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.29■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.29■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 AC021231.2-201ENST00000594613 730 ntBASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.27■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.27■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BORCS7-ASMTA0A0B4J1R7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms