Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-2A0A087WT02 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-2A0A087WT02 NTF6A-201ENST00000591175 560 ntBASIC16.69■□□□□ 0.26
TRAV9-2A0A087WT02 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV9-2A0A087WT02 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV9-2A0A087WT02 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-2A0A087WT02 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV9-2A0A087WT02 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 RP9P-202ENST00000450133 1212 ntBASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-2A0A087WT02 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV9-2A0A087WT02 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 AC025884.2-201ENST00000553429 711 ntBASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-2A0A087WT02 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-2A0A087WT02 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
TRAV9-2A0A087WT02 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
TRAV9-2A0A087WT02 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 AL359504.2-201ENST00000605506 1601 ntBASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV9-2A0A087WT02 SLC6A10P-202ENST00000431994 2058 ntBASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms