Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV20-1A0A075B6N2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC15.12■□□□□ 0.01
TRBV20-1A0A075B6N2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRBV20-1A0A075B6N2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV20-1A0A075B6N2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV20-1A0A075B6N2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRBV20-1A0A075B6N2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV20-1A0A075B6N2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV20-1A0A075B6N2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.11■□□□□ 0.01
TRBV20-1A0A075B6N2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 ANOS2P-203ENST00000472227 1816 ntBASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 ESRRAP2-201ENST00000418437 1549 ntBASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV20-1A0A075B6N2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 AC092068.2-201ENST00000590491 1708 ntBASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV20-1A0A075B6N2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV20-1A0A075B6N2 C11orf96-202ENST00000528572 1834 ntBASIC15.08■□□□□ 0.01
TRBV20-1A0A075B6N2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV20-1A0A075B6N2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV20-1A0A075B6N2 FBXW4P1-201ENST00000426721 2239 ntBASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRBV20-1A0A075B6N2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 AC138932.1-201ENST00000534164 6830 ntBASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRBV20-1A0A075B6N2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV20-1A0A075B6N2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV20-1A0A075B6N2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRBV20-1A0A075B6N2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV20-1A0A075B6N2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV20-1A0A075B6N2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRBV20-1A0A075B6N2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV20-1A0A075B6N2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRBV20-1A0A075B6N2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRBV20-1A0A075B6N2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms