Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 AL022342.1-201ENST00000400363 863 ntBASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 TSEN15P1-201ENST00000423257 515 ntBASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 AP006288.1-201ENST00000446065 395 ntBASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 AC068587.3-201ENST00000526613 355 ntBASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NANOGP1Q8N7R0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 KRT18P15-201ENST00000458108 1291 ntBASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 AC067863.1-201ENST00000494933 530 ntBASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 AC011495.1-201ENST00000498085 584 ntBASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 SNHG9-202ENST00000564014 471 ntBASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 AC002472.3-201ENST00000640124 621 ntBASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NANOGP1Q8N7R0 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 AC022144.1-201ENST00000602255 1580 ntBASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.78□□□□□ -0.36
NANOGP1Q8N7R0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms