Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 AC106818.1-201ENST00000623223 3242 ntBASIC11.48□□□□□ -0.57
FAM78BQ5VT40 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.48□□□□□ -0.57
FAM78BQ5VT40 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 RPL13AP25-201ENST00000484130 612 ntBASIC11.48□□□□□ -0.57
FAM78BQ5VT40 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 AC005498.2-205ENST00000593218 784 ntBASIC11.48□□□□□ -0.57
FAM78BQ5VT40 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 AC004840.1-201ENST00000636359 365 ntBASIC11.48□□□□□ -0.57
FAM78BQ5VT40 TUBB8P4-201ENST00000511806 1324 ntBASIC11.48□□□□□ -0.57
FAM78BQ5VT40 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.48□□□□□ -0.57
FAM78BQ5VT40 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 AL589987.1-201ENST00000453380 819 ntBASIC11.47□□□□□ -0.57
FAM78BQ5VT40 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.47□□□□□ -0.57
FAM78BQ5VT40 VDAC1P7-201ENST00000462417 847 ntBASIC11.47□□□□□ -0.57
FAM78BQ5VT40 SPDYE18-201ENST00000510091 1050 ntBASIC11.47□□□□□ -0.57
FAM78BQ5VT40 RNA5SP421-201ENST00000516864 134 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms