Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.11
AP1S1P61966 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AP1S1P61966 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.39□□□□□ -0.11
AP1S1P61966 AC092053.3-201ENST00000641308 4975 ntBASIC14.39□□□□□ -0.11
AP1S1P61966 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
AP1S1P61966 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 KRT17P5-201ENST00000332088 839 ntBASIC14.39□□□□□ -0.11
AP1S1P61966 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 OR8T1P-201ENST00000421347 918 ntBASIC14.39□□□□□ -0.11
AP1S1P61966 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.39□□□□□ -0.11
AP1S1P61966 RPSAP15-201ENST00000448168 861 ntBASIC14.39□□□□□ -0.11
AP1S1P61966 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 AC008723.1-201ENST00000506922 207 ntBASIC14.39□□□□□ -0.11
AP1S1P61966 AC242376.1-201ENST00000559033 726 ntBASIC14.39□□□□□ -0.11
AP1S1P61966 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.39□□□□□ -0.11
AP1S1P61966 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.39□□□□□ -0.11
AP1S1P61966 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
AP1S1P61966 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 KRT18P9-201ENST00000604826 1300 ntBASIC14.39□□□□□ -0.11
AP1S1P61966 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S1P61966 LINC01230-201ENST00000625222 3017 ntBASIC14.39□□□□□ -0.11
AP1S1P61966 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 KRT8P24-201ENST00000560290 1559 ntBASIC14.39□□□□□ -0.11
AP1S1P61966 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S1P61966 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AP1S1P61966 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 AC138969.2-201ENST00000532739 9932 ntBASIC14.38□□□□□ -0.11
AP1S1P61966 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.38□□□□□ -0.11
AP1S1P61966 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.38□□□□□ -0.11
AP1S1P61966 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 AC007274.2-201ENST00000421675 662 ntBASIC14.38□□□□□ -0.11
AP1S1P61966 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 AC026320.2-201ENST00000434379 478 ntBASIC14.38□□□□□ -0.11
AP1S1P61966 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.38□□□□□ -0.11
AP1S1P61966 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.38□□□□□ -0.11
AP1S1P61966 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.38□□□□□ -0.11
AP1S1P61966 CHCHD2P2-201ENST00000503744 321 ntBASIC14.38□□□□□ -0.11
AP1S1P61966 AC116345.2-201ENST00000512837 523 ntBASIC14.38□□□□□ -0.11
AP1S1P61966 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
AP1S1P61966 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.38□□□□□ -0.11
AP1S1P61966 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.38□□□□□ -0.11
AP1S1P61966 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S1P61966 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S1P61966 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms