Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.74□□□□□ -0.37
LHX2P50458 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LHX2P50458 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
LHX2P50458 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.74□□□□□ -0.37
LHX2P50458 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 OR2I1P-209ENST00000641730 5365 ntBASIC12.74□□□□□ -0.37
LHX2P50458 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 AC074138.1-201ENST00000611182 1303 ntBASIC12.74□□□□□ -0.37
LHX2P50458 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 AP000356.3-201ENST00000382243 753 ntBASIC12.74□□□□□ -0.37
LHX2P50458 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LHX2P50458 AL512430.1-201ENST00000392575 860 ntBASIC12.74□□□□□ -0.37
LHX2P50458 AL627422.1-201ENST00000434104 580 ntBASIC12.74□□□□□ -0.37
LHX2P50458 NOC2LP1-201ENST00000450578 752 ntBASIC12.74□□□□□ -0.37
LHX2P50458 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.74□□□□□ -0.37
LHX2P50458 GOLGA2P8-201ENST00000505201 779 ntBASIC12.74□□□□□ -0.37
LHX2P50458 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.74□□□□□ -0.37
LHX2P50458 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.74□□□□□ -0.37
LHX2P50458 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.74□□□□□ -0.37
LHX2P50458 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.74□□□□□ -0.37
LHX2P50458 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.74□□□□□ -0.37
LHX2P50458 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.74□□□□□ -0.37
LHX2P50458 RN7SL665P-201ENST00000578793 300 ntBASIC12.74□□□□□ -0.37
LHX2P50458 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.74□□□□□ -0.37
LHX2P50458 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
LHX2P50458 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.74□□□□□ -0.37
LHX2P50458 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LHX2P50458 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.74□□□□□ -0.37
LHX2P50458 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LHX2P50458 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 TCAM1P-207ENST00000485295 1537 ntBASIC12.73□□□□□ -0.37
LHX2P50458 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.73□□□□□ -0.37
LHX2P50458 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LHX2P50458 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.73□□□□□ -0.37
LHX2P50458 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.73□□□□□ -0.37
LHX2P50458 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LHX2P50458 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.73□□□□□ -0.37
LHX2P50458 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LHX2P50458 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.73□□□□□ -0.37
LHX2P50458 AC016397.2-201ENST00000624848 1985 ntBASIC12.73□□□□□ -0.37
LHX2P50458 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.73□□□□□ -0.37
LHX2P50458 MIR33B-201ENST00000385104 96 ntBASIC12.73□□□□□ -0.37
LHX2P50458 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.73□□□□□ -0.37
LHX2P50458 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.73□□□□□ -0.37
LHX2P50458 CHCHD2P9-201ENST00000461726 456 ntBASIC12.73□□□□□ -0.37
LHX2P50458 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 AC130709.1-201ENST00000484779 1212 ntBASIC12.73□□□□□ -0.37
LHX2P50458 RN7SL81P-201ENST00000493781 261 ntBASIC12.73□□□□□ -0.37
LHX2P50458 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.73□□□□□ -0.37
LHX2P50458 RN7SL190P-201ENST00000582519 257 ntBASIC12.73□□□□□ -0.37
LHX2P50458 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.73□□□□□ -0.37
LHX2P50458 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 AL805961.1-201ENST00000642026 753 ntBASIC12.73□□□□□ -0.37
LHX2P50458 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms