Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 AL031595.1-201ENST00000623969 4709 ntBASIC14.49□□□□□ -0.09
HLA-DPA1P20036 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 FAM86MP-201ENST00000340703 885 ntBASIC14.49□□□□□ -0.09
HLA-DPA1P20036 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 MIR1908-201ENST00000410394 80 ntBASIC14.49□□□□□ -0.09
HLA-DPA1P20036 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 ACTBP11-201ENST00000436287 1126 ntBASIC14.49□□□□□ -0.09
HLA-DPA1P20036 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 KRT18P15-201ENST00000458108 1291 ntBASIC14.49□□□□□ -0.09
HLA-DPA1P20036 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 TMEM198B-204ENST00000484016 896 ntBASIC14.49□□□□□ -0.09
HLA-DPA1P20036 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 AL132994.2-201ENST00000603120 687 ntBASIC14.49□□□□□ -0.09
HLA-DPA1P20036 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 BAP1-211ENST00000615113 489 ntBASIC14.49□□□□□ -0.09
HLA-DPA1P20036 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DPA1P20036 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AC092580.1-201ENST00000433998 658 ntBASIC14.48□□□□□ -0.09
HLA-DPA1P20036 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AC104306.2-201ENST00000451877 341 ntBASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AC104073.2-201ENST00000453737 312 ntBASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AC009779.1-201ENST00000551138 283 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms