Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.64□□□□□ -0.39
ATF1P18846 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 AL138709.1-201ENST00000614840 1693 ntBASIC12.64□□□□□ -0.39
ATF1P18846 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
ATF1P18846 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
ATF1P18846 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.64□□□□□ -0.39
ATF1P18846 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
ATF1P18846 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.64□□□□□ -0.39
ATF1P18846 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 TPM3P8-201ENST00000330554 643 ntBASIC12.64□□□□□ -0.39
ATF1P18846 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ATF1P18846 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
ATF1P18846 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
ATF1P18846 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.64□□□□□ -0.39
ATF1P18846 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
ATF1P18846 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 PUDPP3-201ENST00000445368 636 ntBASIC12.64□□□□□ -0.39
ATF1P18846 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ATF1P18846 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.64□□□□□ -0.39
ATF1P18846 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.64□□□□□ -0.39
ATF1P18846 TDH-203ENST00000531764 1110 ntBASIC12.64□□□□□ -0.39
ATF1P18846 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.64□□□□□ -0.39
ATF1P18846 TP53TG3HP-202ENST00000569755 579 ntBASIC12.64□□□□□ -0.39
ATF1P18846 AC027796.2-201ENST00000575326 344 ntBASIC12.64□□□□□ -0.39
ATF1P18846 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ATF1P18846 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.64□□□□□ -0.39
ATF1P18846 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ATF1P18846 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.64□□□□□ -0.39
ATF1P18846 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ATF1P18846 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ATF1P18846 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.64□□□□□ -0.39
ATF1P18846 AC009474.1-201ENST00000455096 1565 ntBASIC12.64□□□□□ -0.39
ATF1P18846 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
ATF1P18846 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.64□□□□□ -0.39
ATF1P18846 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.63□□□□□ -0.39
ATF1P18846 AP000593.2-201ENST00000542775 1433 ntBASIC12.63□□□□□ -0.39
ATF1P18846 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ATF1P18846 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 AL031719.1-201ENST00000623365 2587 ntBASIC12.63□□□□□ -0.39
ATF1P18846 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ATF1P18846 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 AC236430.1-201ENST00000402231 743 ntBASIC12.63□□□□□ -0.39
ATF1P18846 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 RN7SKP175-201ENST00000408472 289 ntBASIC12.63□□□□□ -0.39
ATF1P18846 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 AC002472.2-201ENST00000442739 958 ntBASIC12.63□□□□□ -0.39
ATF1P18846 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.63□□□□□ -0.39
ATF1P18846 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ATF1P18846 AC068587.3-201ENST00000526613 355 ntBASIC12.63□□□□□ -0.39
ATF1P18846 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.63□□□□□ -0.39
ATF1P18846 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.63□□□□□ -0.39
ATF1P18846 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.63□□□□□ -0.39
ATF1P18846 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.63□□□□□ -0.39
ATF1P18846 AC190387.1-201ENST00000551683 408 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms