Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 AC010319.3-201ENST00000597028 470 ntBASIC13.02□□□□□ -0.33
CLUP10909 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.02□□□□□ -0.33
CLUP10909 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLUP10909 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLUP10909 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLUP10909 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.02□□□□□ -0.33
CLUP10909 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CLUP10909 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CLUP10909 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.02□□□□□ -0.33
CLUP10909 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLUP10909 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLUP10909 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLUP10909 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLUP10909 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLUP10909 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLUP10909 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLUP10909 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.01□□□□□ -0.33
CLUP10909 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CLUP10909 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 TPM3P8-201ENST00000330554 643 ntBASIC13.01□□□□□ -0.33
CLUP10909 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 PIN1P1-201ENST00000412108 996 ntBASIC13.01□□□□□ -0.33
CLUP10909 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 BCRP1-201ENST00000444246 691 ntBASIC13.01□□□□□ -0.33
CLUP10909 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.01□□□□□ -0.33
CLUP10909 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.01□□□□□ -0.33
CLUP10909 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.01□□□□□ -0.33
CLUP10909 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.01□□□□□ -0.33
CLUP10909 TP53TG3HP-202ENST00000569755 579 ntBASIC13.01□□□□□ -0.33
CLUP10909 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.01□□□□□ -0.33
CLUP10909 OR10B1P-201ENST00000601666 907 ntBASIC13.01□□□□□ -0.33
CLUP10909 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.01□□□□□ -0.33
CLUP10909 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.01□□□□□ -0.33
CLUP10909 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CLUP10909 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLUP10909 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13□□□□□ -0.33
CLUP10909 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13□□□□□ -0.33
CLUP10909 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CLUP10909 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 GOLGA8IP-202ENST00000611635 2100 ntBASIC13□□□□□ -0.33
CLUP10909 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLUP10909 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13□□□□□ -0.33
CLUP10909 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLUP10909 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CLUP10909 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLUP10909 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13□□□□□ -0.33
CLUP10909 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLUP10909 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms