Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 HNRNPA1P41-201ENST00000397777 928 ntBASIC14□□□□□ -0.17
CCNYL3P0C7X3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 AL353637.1-201ENST00000451571 732 ntBASIC14□□□□□ -0.17
CCNYL3P0C7X3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 AL049829.1-201ENST00000465411 156 ntBASIC14□□□□□ -0.17
CCNYL3P0C7X3 NUP210P1-202ENST00000504322 710 ntBASIC14□□□□□ -0.17
CCNYL3P0C7X3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 SNORD3B-2-202ENST00000571722 791 ntBASIC14□□□□□ -0.17
CCNYL3P0C7X3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 AL132994.2-201ENST00000603120 687 ntBASIC14□□□□□ -0.17
CCNYL3P0C7X3 AP000346.4-201ENST00000614827 381 ntBASIC14□□□□□ -0.17
CCNYL3P0C7X3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCNYL3P0C7X3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CCNYL3P0C7X3 BX640514.1-201ENST00000583223 1918 ntBASIC14□□□□□ -0.17
CCNYL3P0C7X3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 AC003102.2-201ENST00000589195 1469 ntBASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 LINC01230-201ENST00000625222 3017 ntBASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 AC244394.1-201ENST00000435000 1665 ntBASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 ALG3P1-201ENST00000508806 1114 ntBASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 AC134698.3-201ENST00000523880 214 ntBASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 AL122018.1-201ENST00000446607 2310 ntBASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCNYL3P0C7X3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 AL031595.1-201ENST00000623969 4709 ntBASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CCNYL3P0C7X3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms