Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TPM3P06753 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 AL442647.2-201ENST00000429864 857 ntBASIC16.16■□□□□ 0.18
TPM3P06753 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 DNAJB3-202ENST00000449667 1266 ntBASIC16.16■□□□□ 0.18
TPM3P06753 FO681548.1-201ENST00000455617 1132 ntBASIC16.16■□□□□ 0.18
TPM3P06753 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM3P06753 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 AC023310.3-201ENST00000557027 670 ntBASIC16.16■□□□□ 0.18
TPM3P06753 AC100756.1-201ENST00000562736 682 ntBASIC16.16■□□□□ 0.18
TPM3P06753 AC138749.3-201ENST00000567691 622 ntBASIC16.16■□□□□ 0.18
TPM3P06753 AC116165.1-201ENST00000611806 668 ntBASIC16.16■□□□□ 0.18
TPM3P06753 AP001002.3-201ENST00000623482 206 ntBASIC16.16■□□□□ 0.18
TPM3P06753 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TPM3P06753 TP73-203ENST00000357733 4899 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM3P06753 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM3P06753 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
TPM3P06753 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TPM3P06753 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM3P06753 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 AC125807.2-201ENST00000513358 3514 ntBASIC16.15■□□□□ 0.18
TPM3P06753 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.15■□□□□ 0.18
TPM3P06753 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TPM3P06753 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.15■□□□□ 0.18
TPM3P06753 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.15■□□□□ 0.18
TPM3P06753 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.15■□□□□ 0.18
TPM3P06753 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TPM3P06753 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.15■□□□□ 0.18
TPM3P06753 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC16.15■□□□□ 0.18
TPM3P06753 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.15■□□□□ 0.18
TPM3P06753 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TPM3P06753 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TPM3P06753 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 AC064801.2-201ENST00000625052 1303 ntBASIC16.15■□□□□ 0.18
TPM3P06753 CICP1-201ENST00000416803 2410 ntBASIC16.15■□□□□ 0.18
TPM3P06753 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TPM3P06753 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TPM3P06753 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TPM3P06753 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
TPM3P06753 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TPM3P06753 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TPM3P06753 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TPM3P06753 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
TPM3P06753 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 AL445209.1-201ENST00000607269 3491 ntBASIC16.14■□□□□ 0.17
TPM3P06753 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TPM3P06753 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TPM3P06753 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms