Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 AC005702.4-201ENST00000618393 416 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 AC116407.3-201ENST00000623905 1129 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 AC073862.5-201ENST00000624129 2027 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.39□□□□□ -0.59
IFNA1P01562 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
IFNA1P01562 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.39□□□□□ -0.59
IFNA1P01562 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
IFNA1P01562 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
IFNA1P01562 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
IFNA1P01562 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 AC064801.2-201ENST00000625052 1303 ntBASIC11.38□□□□□ -0.59
IFNA1P01562 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 AL845472.1-202ENST00000624675 4080 ntBASIC11.38□□□□□ -0.59
IFNA1P01562 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 AC015819.3-201ENST00000624305 2674 ntBASIC11.38□□□□□ -0.59
IFNA1P01562 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.38□□□□□ -0.59
IFNA1P01562 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.38□□□□□ -0.59
IFNA1P01562 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 NUS1P3-201ENST00000423502 862 ntBASIC11.38□□□□□ -0.59
IFNA1P01562 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.38□□□□□ -0.59
IFNA1P01562 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.38□□□□□ -0.59
IFNA1P01562 MTND6P24-201ENST00000440466 518 ntBASIC11.38□□□□□ -0.59
IFNA1P01562 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.38□□□□□ -0.59
IFNA1P01562 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.38□□□□□ -0.59
IFNA1P01562 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
IFNA1P01562 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.38□□□□□ -0.59
IFNA1P01562 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.38□□□□□ -0.59
IFNA1P01562 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.38□□□□□ -0.59
IFNA1P01562 LINC01225-203ENST00000563550 1244 ntBASIC11.38□□□□□ -0.59
IFNA1P01562 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.38□□□□□ -0.59
IFNA1P01562 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.38□□□□□ -0.59
IFNA1P01562 AC026120.1-201ENST00000611536 926 ntBASIC11.38□□□□□ -0.59
IFNA1P01562 AC018529.1-201ENST00000613063 361 ntBASIC11.38□□□□□ -0.59
IFNA1P01562 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.38□□□□□ -0.59
IFNA1P01562 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.38□□□□□ -0.59
IFNA1P01562 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 PCDHB19P-202ENST00000625133 2914 ntBASIC11.38□□□□□ -0.59
IFNA1P01562 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.38□□□□□ -0.59
IFNA1P01562 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
IFNA1P01562 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
IFNA1P01562 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC11.37□□□□□ -0.59
IFNA1P01562 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC11.37□□□□□ -0.59
IFNA1P01562 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
IFNA1P01562 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
IFNA1P01562 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
IFNA1P01562 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.37□□□□□ -0.59
IFNA1P01562 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
IFNA1P01562 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.37□□□□□ -0.59
IFNA1P01562 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms