Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 AC073869.1-201ENST00000415574 2762 ntBASIC12.32□□□□□ -0.44
TMEM235A6NFC5 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 FKBP4P6-201ENST00000457486 1332 ntBASIC12.32□□□□□ -0.44
TMEM235A6NFC5 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AC009474.1-201ENST00000455096 1565 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AC245100.3-201ENST00000441281 285 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 GNAQP1-201ENST00000444815 1067 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 MYCLP2-201ENST00000449268 967 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 ALG3P1-201ENST00000508806 1114 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AC055876.2-201ENST00000531834 546 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 TNRC18P1-201ENST00000502875 3650 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 AC009093.2-202ENST00000620513 2079 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 STRCP1-201ENST00000509801 5328 ntBASIC12.31□□□□□ -0.44
TMEM235A6NFC5 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM235A6NFC5 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM235A6NFC5 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms