Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 IMP3P2-201ENST00000489760 475 ntBASIC20.65■□□□□ 0.9
SIN3AQ96ST3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 KRT8P1-201ENST00000557533 1207 ntBASIC20.65■□□□□ 0.9
SIN3AQ96ST3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 AL133499.1-201ENST00000596207 608 ntBASIC20.65■□□□□ 0.9
SIN3AQ96ST3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SIN3AQ96ST3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SIN3AQ96ST3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SIN3AQ96ST3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SIN3AQ96ST3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 RPSAP15-201ENST00000448168 861 ntBASIC20.64■□□□□ 0.89
SIN3AQ96ST3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIN3AQ96ST3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 AC026320.2-201ENST00000434379 478 ntBASIC20.63■□□□□ 0.89
SIN3AQ96ST3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 FGFR3P5-201ENST00000564496 886 ntBASIC20.63■□□□□ 0.89
SIN3AQ96ST3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 AL021707.6-201ENST00000609212 491 ntBASIC20.63■□□□□ 0.89
SIN3AQ96ST3 AC079336.7-201ENST00000623428 1078 ntBASIC20.63■□□□□ 0.89
SIN3AQ96ST3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 GOLGA8IP-202ENST00000611635 2100 ntBASIC20.63■□□□□ 0.89
SIN3AQ96ST3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SIN3AQ96ST3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC20.62■□□□□ 0.89
SIN3AQ96ST3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIN3AQ96ST3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SIN3AQ96ST3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC20.62■□□□□ 0.89
SIN3AQ96ST3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIN3AQ96ST3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms