Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 CTBP2P6-201ENST00000526402 1229 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC078814.4-201ENST00000546650 327 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 BMF-206ENST00000558774 671 ntTSL 3 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.04■□□□□ 0.32
SNED1Q8TER0 CR392039.1-201ENST00000623217 204 ntBASIC17.04■□□□□ 0.32
SNED1Q8TER0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 DKKL1P1-201ENST00000400550 698 ntBASIC17.03■□□□□ 0.32
SNED1Q8TER0 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 GULOP-201ENST00000454030 748 ntBASIC17.03■□□□□ 0.32
SNED1Q8TER0 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 AC080013.5-201ENST00000607044 679 ntBASIC17.03■□□□□ 0.32
SNED1Q8TER0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC17.03■□□□□ 0.32
SNED1Q8TER0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNED1Q8TER0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNED1Q8TER0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNED1Q8TER0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNED1Q8TER0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNED1Q8TER0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SNED1Q8TER0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SNED1Q8TER0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNED1Q8TER0 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNED1Q8TER0 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.02■□□□□ 0.32
SNED1Q8TER0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.02■□□□□ 0.32
SNED1Q8TER0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.02■□□□□ 0.32
SNED1Q8TER0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNED1Q8TER0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.02■□□□□ 0.32
SNED1Q8TER0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.02■□□□□ 0.32
SNED1Q8TER0 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNED1Q8TER0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNED1Q8TER0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.02■□□□□ 0.32
SNED1Q8TER0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.02■□□□□ 0.31
SNED1Q8TER0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SNED1Q8TER0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 KRT8P30-201ENST00000432100 650 ntBASIC17.02■□□□□ 0.31
SNED1Q8TER0 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.02■□□□□ 0.31
SNED1Q8TER0 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.02■□□□□ 0.31
SNED1Q8TER0 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.02■□□□□ 0.31
SNED1Q8TER0 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.02■□□□□ 0.31
SNED1Q8TER0 MIR8071-1-201ENST00000616769 65 ntBASIC17.02■□□□□ 0.31
SNED1Q8TER0 MIR8071-2-201ENST00000616772 65 ntBASIC17.02■□□□□ 0.31
SNED1Q8TER0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SNED1Q8TER0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 AC140479.7-201ENST00000636301 2332 ntBASIC17.02■□□□□ 0.31
SNED1Q8TER0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.02■□□□□ 0.31
SNED1Q8TER0 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.02■□□□□ 0.31
SNED1Q8TER0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNED1Q8TER0 AC090505.1-201ENST00000430515 1834 ntBASIC17.02■□□□□ 0.31
SNED1Q8TER0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms