Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.41□□□□□ -0.58
TTC9CQ8N5M4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 LAP3P2-201ENST00000454686 1454 ntBASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 TUBB8P8-201ENST00000458717 1058 ntBASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 STRCP1-201ENST00000509801 5328 ntBASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TTC9CQ8N5M4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TTC9CQ8N5M4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
TTC9CQ8N5M4 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TTC9CQ8N5M4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.59
TTC9CQ8N5M4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
TTC9CQ8N5M4 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TTC9CQ8N5M4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms