Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AL355385.1-201ENST00000606123 409 ntBASIC13.42□□□□□ -0.26
REEP3Q6NUK4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.42□□□□□ -0.26
REEP3Q6NUK4 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.41□□□□□ -0.26
REEP3Q6NUK4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AHCYP2-201ENST00000430630 1300 ntBASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AL008718.2-201ENST00000609206 1313 ntBASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 ST13P19-201ENST00000442505 1124 ntBASIC13.41□□□□□ -0.26
REEP3Q6NUK4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 DUX4L46-201ENST00000566845 751 ntBASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.41□□□□□ -0.26
REEP3Q6NUK4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.41□□□□□ -0.26
REEP3Q6NUK4 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 PDIA3P1-201ENST00000471856 1510 ntBASIC13.4□□□□□ -0.26
REEP3Q6NUK4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
REEP3Q6NUK4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms