Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.48□□□□□ -0.41
CBX5P45973 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.48□□□□□ -0.41
CBX5P45973 AC114812.1-204ENST00000449669 728 ntBASIC12.48□□□□□ -0.41
CBX5P45973 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.48□□□□□ -0.41
CBX5P45973 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 AC026434.2-201ENST00000506094 1078 ntBASIC12.48□□□□□ -0.41
CBX5P45973 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 AC069120.2-201ENST00000524091 540 ntBASIC12.48□□□□□ -0.41
CBX5P45973 AC027369.6-201ENST00000525520 931 ntBASIC12.48□□□□□ -0.41
CBX5P45973 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 AC131206.1-201ENST00000538078 1211 ntBASIC12.48□□□□□ -0.41
CBX5P45973 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.48□□□□□ -0.41
CBX5P45973 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.48□□□□□ -0.41
CBX5P45973 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.48□□□□□ -0.41
CBX5P45973 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.48□□□□□ -0.41
CBX5P45973 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
CBX5P45973 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 FAM90A12P-201ENST00000519497 2375 ntBASIC12.48□□□□□ -0.41
CBX5P45973 FAM90A24P-201ENST00000520792 2369 ntBASIC12.48□□□□□ -0.41
CBX5P45973 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CBX5P45973 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.48□□□□□ -0.41
CBX5P45973 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.47□□□□□ -0.41
CBX5P45973 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC12.47□□□□□ -0.41
CBX5P45973 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CBX5P45973 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CBX5P45973 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.47□□□□□ -0.41
CBX5P45973 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CBX5P45973 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.47□□□□□ -0.41
CBX5P45973 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
CBX5P45973 AC026992.2-203ENST00000563004 2419 ntBASIC12.47□□□□□ -0.41
CBX5P45973 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CBX5P45973 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.47□□□□□ -0.41
CBX5P45973 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.47□□□□□ -0.41
CBX5P45973 GIMAP3P-201ENST00000495150 836 ntBASIC12.47□□□□□ -0.41
CBX5P45973 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.47□□□□□ -0.41
CBX5P45973 SORD2P-201ENST00000558556 1069 ntBASIC12.47□□□□□ -0.41
CBX5P45973 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.47□□□□□ -0.41
CBX5P45973 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CBX5P45973 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.47□□□□□ -0.41
CBX5P45973 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CBX5P45973 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CBX5P45973 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.47□□□□□ -0.41
CBX5P45973 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.47□□□□□ -0.41
CBX5P45973 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CBX5P45973 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.47□□□□□ -0.41
CBX5P45973 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CBX5P45973 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CBX5P45973 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.46□□□□□ -0.41
CBX5P45973 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CBX5P45973 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
CBX5P45973 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.46□□□□□ -0.41
CBX5P45973 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.46□□□□□ -0.41
CBX5P45973 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CBX5P45973 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms