Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.18□□□□□ -0.3
NR4A2P43354 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.18□□□□□ -0.3
NR4A2P43354 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.18□□□□□ -0.3
NR4A2P43354 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.18□□□□□ -0.3
NR4A2P43354 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NR4A2P43354 AL033527.4-201ENST00000641026 673 ntBASIC13.18□□□□□ -0.3
NR4A2P43354 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NR4A2P43354 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NR4A2P43354 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.18□□□□□ -0.3
NR4A2P43354 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.18□□□□□ -0.3
NR4A2P43354 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.18□□□□□ -0.3
NR4A2P43354 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.18□□□□□ -0.3
NR4A2P43354 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A2P43354 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.17□□□□□ -0.3
NR4A2P43354 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 ANKRD19P-201ENST00000338192 862 ntBASIC13.17□□□□□ -0.3
NR4A2P43354 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.17□□□□□ -0.3
NR4A2P43354 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 KLF2P4-201ENST00000451959 1225 ntBASIC13.17□□□□□ -0.3
NR4A2P43354 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.17□□□□□ -0.3
NR4A2P43354 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.17□□□□□ -0.3
NR4A2P43354 AL049840.4-201ENST00000602422 811 ntBASIC13.17□□□□□ -0.3
NR4A2P43354 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 AL354702.1-201ENST00000442006 1960 ntBASIC13.17□□□□□ -0.3
NR4A2P43354 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.17□□□□□ -0.3
NR4A2P43354 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NR4A2P43354 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NR4A2P43354 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.17□□□□□ -0.3
NR4A2P43354 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NR4A2P43354 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A2P43354 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.16□□□□□ -0.3
NR4A2P43354 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NR4A2P43354 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.16□□□□□ -0.3
NR4A2P43354 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.16□□□□□ -0.3
NR4A2P43354 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
NR4A2P43354 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NR4A2P43354 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.16□□□□□ -0.3
NR4A2P43354 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.16□□□□□ -0.3
NR4A2P43354 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.16□□□□□ -0.3
NR4A2P43354 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.16□□□□□ -0.3
NR4A2P43354 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
NR4A2P43354 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.16□□□□□ -0.3
NR4A2P43354 CTBP2P5-201ENST00000454986 1264 ntBASIC13.16□□□□□ -0.3
NR4A2P43354 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.16□□□□□ -0.3
NR4A2P43354 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NR4A2P43354 AC124283.3-201ENST00000570869 594 ntBASIC13.16□□□□□ -0.3
NR4A2P43354 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms