Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGCLP35914 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HMGCLP35914 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HMGCLP35914 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGCLP35914 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCLP35914 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HMGCLP35914 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCLP35914 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCLP35914 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
HMGCLP35914 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
HMGCLP35914 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HMGCLP35914 FRMPD2B-201ENST00000431305 1347 ntBASIC14.25□□□□□ -0.13
HMGCLP35914 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HMGCLP35914 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HMGCLP35914 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.25□□□□□ -0.13
HMGCLP35914 SPTLC1P5-201ENST00000450718 252 ntBASIC14.25□□□□□ -0.13
HMGCLP35914 TMEM198B-204ENST00000484016 896 ntBASIC14.25□□□□□ -0.13
HMGCLP35914 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.25□□□□□ -0.13
HMGCLP35914 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.25□□□□□ -0.13
HMGCLP35914 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HMGCLP35914 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HMGCLP35914 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.25□□□□□ -0.13
HMGCLP35914 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGCLP35914 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HMGCLP35914 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HMGCLP35914 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 LINC02486-201ENST00000604157 3000 ntBASIC14.25□□□□□ -0.13
HMGCLP35914 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGCLP35914 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.25□□□□□ -0.13
HMGCLP35914 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCLP35914 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCLP35914 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HMGCLP35914 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HMGCLP35914 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.24□□□□□ -0.13
HMGCLP35914 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCLP35914 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 MIR769-201ENST00000390225 118 ntBASIC14.24□□□□□ -0.13
HMGCLP35914 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 RPS9P1-201ENST00000419943 583 ntBASIC14.24□□□□□ -0.13
HMGCLP35914 ISCA2P1-201ENST00000425548 448 ntBASIC14.24□□□□□ -0.13
HMGCLP35914 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCLP35914 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.24□□□□□ -0.13
HMGCLP35914 DUX4L50-201ENST00000455245 715 ntBASIC14.24□□□□□ -0.13
HMGCLP35914 POU5F1P2-201ENST00000521750 823 ntBASIC14.24□□□□□ -0.13
HMGCLP35914 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCLP35914 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HMGCLP35914 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HMGCLP35914 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.24□□□□□ -0.13
HMGCLP35914 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HMGCLP35914 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HMGCLP35914 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMGCLP35914 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.24□□□□□ -0.13
HMGCLP35914 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HMGCLP35914 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMGCLP35914 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms