Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT2P35908 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
KRT2P35908 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT2P35908 AL451050.2-201ENST00000606967 682 ntBASIC16.44■□□□□ 0.22
KRT2P35908 AL022328.3-201ENST00000607943 679 ntBASIC16.44■□□□□ 0.22
KRT2P35908 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT2P35908 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT2P35908 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT2P35908 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
KRT2P35908 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT2P35908 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT2P35908 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
KRT2P35908 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT2P35908 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT2P35908 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT2P35908 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT2P35908 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT2P35908 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT2P35908 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT2P35908 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT2P35908 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
KRT2P35908 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT2P35908 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT2P35908 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT2P35908 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.43■□□□□ 0.22
KRT2P35908 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT2P35908 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
KRT2P35908 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
KRT2P35908 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT2P35908 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 LINC00115-201ENST00000473798 1317 ntBASIC16.43■□□□□ 0.22
KRT2P35908 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT2P35908 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
KRT2P35908 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT2P35908 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT2P35908 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
KRT2P35908 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT2P35908 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT2P35908 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KRT2P35908 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT2P35908 FAM86MP-201ENST00000340703 885 ntBASIC16.42■□□□□ 0.22
KRT2P35908 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 AC103592.1-201ENST00000394513 664 ntBASIC16.42■□□□□ 0.22
KRT2P35908 HMGA1P1-201ENST00000415560 1062 ntBASIC16.42■□□□□ 0.22
KRT2P35908 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT2P35908 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 AC006033.1-201ENST00000440505 426 ntBASIC16.42■□□□□ 0.22
KRT2P35908 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT2P35908 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT2P35908 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT2P35908 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.42■□□□□ 0.22
KRT2P35908 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT2P35908 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
KRT2P35908 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT2P35908 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT2P35908 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT2P35908 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT2P35908 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT2P35908 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT2P35908 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms