Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
PTPN3P26045 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.64□□□□□ -0.07
PTPN3P26045 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PTPN3P26045 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.64□□□□□ -0.07
PTPN3P26045 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.64□□□□□ -0.07
PTPN3P26045 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.64□□□□□ -0.07
PTPN3P26045 AP002353.1-201ENST00000528257 1599 ntBASIC14.64□□□□□ -0.07
PTPN3P26045 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PTPN3P26045 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PTPN3P26045 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PTPN3P26045 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN3P26045 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.63□□□□□ -0.07
PTPN3P26045 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
PTPN3P26045 AC007952.5-201ENST00000572818 1486 ntBASIC14.63□□□□□ -0.07
PTPN3P26045 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PTPN3P26045 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PTPN3P26045 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.63□□□□□ -0.07
PTPN3P26045 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.63□□□□□ -0.07
PTPN3P26045 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PTPN3P26045 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PTPN3P26045 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PTPN3P26045 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
PTPN3P26045 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PTPN3P26045 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PTPN3P26045 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.63□□□□□ -0.07
PTPN3P26045 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.63□□□□□ -0.07
PTPN3P26045 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.63□□□□□ -0.07
PTPN3P26045 AC104073.2-201ENST00000453737 312 ntBASIC14.63□□□□□ -0.07
PTPN3P26045 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.63□□□□□ -0.07
PTPN3P26045 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.63□□□□□ -0.07
PTPN3P26045 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.63□□□□□ -0.07
PTPN3P26045 AC072061.1-201ENST00000569710 2234 ntBASIC14.63□□□□□ -0.07
PTPN3P26045 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.63□□□□□ -0.07
PTPN3P26045 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.63□□□□□ -0.07
PTPN3P26045 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
PTPN3P26045 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PTPN3P26045 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.63□□□□□ -0.07
PTPN3P26045 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PTPN3P26045 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.62□□□□□ -0.07
PTPN3P26045 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 FAM90A12P-201ENST00000519497 2375 ntBASIC14.62□□□□□ -0.07
PTPN3P26045 FAM90A24P-201ENST00000520792 2369 ntBASIC14.62□□□□□ -0.07
PTPN3P26045 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.62□□□□□ -0.07
PTPN3P26045 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PTPN3P26045 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN3P26045 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.62□□□□□ -0.07
PTPN3P26045 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN3P26045 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN3P26045 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN3P26045 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PTPN3P26045 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN3P26045 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN3P26045 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN3P26045 FAM8A2P-201ENST00000528813 1142 ntBASIC14.62□□□□□ -0.07
PTPN3P26045 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.62□□□□□ -0.07
PTPN3P26045 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.62□□□□□ -0.07
PTPN3P26045 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN3P26045 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.62□□□□□ -0.07
PTPN3P26045 SNORD3B-2-202ENST00000571722 791 ntBASIC14.62□□□□□ -0.07
PTPN3P26045 RN7SL163P-201ENST00000583100 276 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms