Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.42□□□□□ -0.26
PRKCAP17252 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
PRKCAP17252 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
PRKCAP17252 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.42□□□□□ -0.26
PRKCAP17252 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
PRKCAP17252 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.42□□□□□ -0.26
PRKCAP17252 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
PRKCAP17252 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PRKCAP17252 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 AC131212.3-201ENST00000624087 4219 ntBASIC13.41□□□□□ -0.26
PRKCAP17252 AL590440.2-201ENST00000641973 1595 ntBASIC13.41□□□□□ -0.26
PRKCAP17252 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
PRKCAP17252 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
PRKCAP17252 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
PRKCAP17252 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
PRKCAP17252 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
PRKCAP17252 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
PRKCAP17252 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.41□□□□□ -0.26
PRKCAP17252 HIST2H2BB-201ENST00000449108 381 ntBASIC13.41□□□□□ -0.26
PRKCAP17252 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.41□□□□□ -0.26
PRKCAP17252 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 DUX4L45-201ENST00000566406 1057 ntBASIC13.41□□□□□ -0.26
PRKCAP17252 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 AC008825.2-201ENST00000603374 718 ntBASIC13.41□□□□□ -0.26
PRKCAP17252 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.41□□□□□ -0.26
PRKCAP17252 AC139712.1-201ENST00000378256 1875 ntBASIC13.41□□□□□ -0.26
PRKCAP17252 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
PRKCAP17252 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
PRKCAP17252 PEG13-201ENST00000631594 5667 ntBASIC13.41□□□□□ -0.26
PRKCAP17252 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.41□□□□□ -0.26
PRKCAP17252 AL031595.1-201ENST00000623969 4709 ntBASIC13.41□□□□□ -0.26
PRKCAP17252 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
PRKCAP17252 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.4□□□□□ -0.26
PRKCAP17252 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 MYADML-201ENST00000474610 2147 ntBASIC13.4□□□□□ -0.26
PRKCAP17252 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PRKCAP17252 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
PRKCAP17252 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PRKCAP17252 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.4□□□□□ -0.26
PRKCAP17252 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
PRKCAP17252 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
PRKCAP17252 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.4□□□□□ -0.26
PRKCAP17252 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRKCAP17252 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms