Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 AC011840.2-201ENST00000563063 1520 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 AC015802.1-201ENST00000588104 1449 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 AC067750.1-201ENST00000608826 6545 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 MXRA5Y-201ENST00000420610 8000 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 CLUHP2-201ENST00000426660 1303 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 PEG13-201ENST00000631594 5667 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 MIR1247-201ENST00000408206 136 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 NUS1P3-201ENST00000423502 862 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
NACAE9PAV3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC10.64□□□□□ -0.71
NACAE9PAV3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.64□□□□□ -0.71
NACAE9PAV3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 AC108725.1-201ENST00000495472 409 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC10.64□□□□□ -0.71
NACAE9PAV3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 AC079316.1-201ENST00000548397 411 ntBASIC10.64□□□□□ -0.71
NACAE9PAV3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NACAE9PAV3 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
NACAE9PAV3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
NACAE9PAV3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC10.63□□□□□ -0.71
NACAE9PAV3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 AC134312.5-201ENST00000568031 1313 ntBASIC10.63□□□□□ -0.71
NACAE9PAV3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.63□□□□□ -0.71
NACAE9PAV3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
NACAE9PAV3 RN7SKP175-201ENST00000408472 289 ntBASIC10.63□□□□□ -0.71
NACAE9PAV3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 AC016694.1-201ENST00000434179 700 ntBASIC10.63□□□□□ -0.71
NACAE9PAV3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC10.63□□□□□ -0.71
NACAE9PAV3 AC099548.2-209ENST00000480264 625 ntBASIC10.63□□□□□ -0.71
NACAE9PAV3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
NACAE9PAV3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
NACAE9PAV3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC10.63□□□□□ -0.71
NACAE9PAV3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
NACAE9PAV3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC10.63□□□□□ -0.71
NACAE9PAV3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
NACAE9PAV3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
NACAE9PAV3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms