Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIN3AQ96ST3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AC130686.1-201ENST00000622936 2466 ntBASIC20.67■□□□□ 0.9
SIN3AQ96ST3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AC068760.1-201ENST00000493579 1953 ntBASIC20.67■□□□□ 0.9
SIN3AQ96ST3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 ELK2AP-201ENST00000392510 1007 ntBASIC20.67■□□□□ 0.9
SIN3AQ96ST3 HMGA1P1-201ENST00000415560 1062 ntBASIC20.67■□□□□ 0.9
SIN3AQ96ST3 BCYRN1-201ENST00000418539 200 ntBASIC20.67■□□□□ 0.9
SIN3AQ96ST3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AC005740.1-201ENST00000515639 522 ntBASIC20.67■□□□□ 0.9
SIN3AQ96ST3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 RN7SL455P-201ENST00000580629 282 ntBASIC20.67■□□□□ 0.9
SIN3AQ96ST3 MIR4754-201ENST00000582477 89 ntBASIC20.67■□□□□ 0.9
SIN3AQ96ST3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SIN3AQ96ST3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 FAM90A12P-201ENST00000519497 2375 ntBASIC20.66■□□□□ 0.9
SIN3AQ96ST3 FAM90A24P-201ENST00000520792 2369 ntBASIC20.66■□□□□ 0.9
SIN3AQ96ST3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 TMEM198B-204ENST00000484016 896 ntBASIC20.66■□□□□ 0.9
SIN3AQ96ST3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 RTN3P1-201ENST00000536295 711 ntBASIC20.66■□□□□ 0.9
SIN3AQ96ST3 AC242376.1-201ENST00000559033 726 ntBASIC20.66■□□□□ 0.9
SIN3AQ96ST3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 AL133338.1-201ENST00000565695 1517 ntBASIC20.66■□□□□ 0.9
SIN3AQ96ST3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
SIN3AQ96ST3 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIN3AQ96ST3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms