Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 SCARNA20.5-201ENST00000516991 142 ntBASIC15.21■□□□□ 0.03
UBA3Q8TBC4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBA3Q8TBC4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
UBA3Q8TBC4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
UBA3Q8TBC4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.21■□□□□ 0.02
UBA3Q8TBC4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBA3Q8TBC4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
UBA3Q8TBC4 AC090643.2-201ENST00000623442 2029 ntBASIC15.21■□□□□ 0.02
UBA3Q8TBC4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
UBA3Q8TBC4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBA3Q8TBC4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBA3Q8TBC4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 AL157791.1-201ENST00000553667 1699 ntBASIC15.2■□□□□ 0.02
UBA3Q8TBC4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 USP17L6P-201ENST00000382470 1197 ntBASIC15.2■□□□□ 0.02
UBA3Q8TBC4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ACTG1P2-201ENST00000415776 1125 ntBASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ACTG1P11-201ENST00000425411 1125 ntBASIC15.2■□□□□ 0.02
UBA3Q8TBC4 TSPY25P-201ENST00000429463 745 ntBASIC15.2■□□□□ 0.02
UBA3Q8TBC4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.2■□□□□ 0.02
UBA3Q8TBC4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
UBA3Q8TBC4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms