Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 SLC25A6P4-201ENST00000586535 553 ntBASIC10.78□□□□□ -0.68
NUP35Q8NFH5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC10.78□□□□□ -0.68
NUP35Q8NFH5 AC107373.2-201ENST00000607735 490 ntBASIC10.78□□□□□ -0.68
NUP35Q8NFH5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.78□□□□□ -0.68
NUP35Q8NFH5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 PDIA3P1-201ENST00000471856 1510 ntBASIC10.78□□□□□ -0.68
NUP35Q8NFH5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 AL805961.2-201ENST00000642139 4817 ntBASIC10.77□□□□□ -0.68
NUP35Q8NFH5 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
NUP35Q8NFH5 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 RPL37AP1-201ENST00000412502 279 ntBASIC10.77□□□□□ -0.69
NUP35Q8NFH5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 AC003958.1-201ENST00000435883 421 ntBASIC10.77□□□□□ -0.69
NUP35Q8NFH5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 SDHAP3-202ENST00000515467 728 ntBASIC10.77□□□□□ -0.69
NUP35Q8NFH5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 AL512361.1-201ENST00000554200 418 ntBASIC10.77□□□□□ -0.69
NUP35Q8NFH5 MIR4453-201ENST00000584019 89 ntBASIC10.77□□□□□ -0.69
NUP35Q8NFH5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 FAM197Y3-203ENST00000618346 717 ntBASIC10.77□□□□□ -0.69
NUP35Q8NFH5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 C2-209ENST00000452323 1999 ntTSL 2 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 AL138725.1-201ENST00000407347 1314 ntBASIC10.77□□□□□ -0.69
NUP35Q8NFH5 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
NUP35Q8NFH5 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms