Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN22Q8N7P3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
CLDN22Q8N7P3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
CLDN22Q8N7P3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 MARK2P9-201ENST00000430958 1727 ntBASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 AL031595.1-201ENST00000623969 4709 ntBASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 AL391647.1-201ENST00000395664 511 ntBASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN22Q8N7P3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 AC118758.2-201ENST00000614242 2813 ntBASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 AP002761.4-201ENST00000565433 3361 ntBASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN22Q8N7P3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms