Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 BCL2L12P1-201ENST00000508390 733 ntBASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 AL590235.1-201ENST00000564650 861 ntBASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 AC011462.4-201ENST00000616866 449 ntBASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 FUCA1P1-201ENST00000374476 1351 ntBASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 AP002353.1-201ENST00000528257 1599 ntBASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OTOP1Q7RTM1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
OTOP1Q7RTM1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
OTOP1Q7RTM1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.46■□□□□ 0.22
OTOP1Q7RTM1 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 RNVU1-8-201ENST00000364272 125 ntBASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 OR8T1P-201ENST00000421347 918 ntBASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 SCARNA12-201ENST00000459155 270 ntBASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 AC124068.2-201ENST00000569473 1109 ntBASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 AL160191.2-201ENST00000603975 601 ntBASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OTOP1Q7RTM1 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 INTS4P1-203ENST00000641008 3683 ntBASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OTOP1Q7RTM1 WASH7P-201ENST00000488147 1351 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms