Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 HINT2P1-201ENST00000419438 481 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.16□□□□□ -0.46
COL8A2P25067 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
COL8A2P25067 MAGEA5-201ENST00000446757 942 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 DUX4L50-201ENST00000455245 715 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 RN7SL530P-201ENST00000485097 298 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 RN7SL67P-201ENST00000492147 296 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.16□□□□□ -0.46
COL8A2P25067 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
COL8A2P25067 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 PRKXP1-201ENST00000561423 1122 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.16□□□□□ -0.46
COL8A2P25067 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.16□□□□□ -0.46
COL8A2P25067 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.16□□□□□ -0.46
COL8A2P25067 AC021016.3-201ENST00000608367 477 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 AL591471.1-201ENST00000621855 229 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 FAM90A2P-201ENST00000511144 1395 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 FAM90A25P-201ENST00000528404 1395 ntBASIC12.16□□□□□ -0.46
COL8A2P25067 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.16□□□□□ -0.46
COL8A2P25067 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
COL8A2P25067 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.15□□□□□ -0.46
COL8A2P25067 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.15□□□□□ -0.46
COL8A2P25067 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
COL8A2P25067 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
COL8A2P25067 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.15□□□□□ -0.46
COL8A2P25067 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.15□□□□□ -0.46
COL8A2P25067 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.15□□□□□ -0.46
COL8A2P25067 RPL8P2-201ENST00000430538 502 ntBASIC12.15□□□□□ -0.46
COL8A2P25067 AC092580.1-201ENST00000433998 658 ntBASIC12.15□□□□□ -0.46
COL8A2P25067 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.15□□□□□ -0.46
COL8A2P25067 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.15□□□□□ -0.46
COL8A2P25067 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.15□□□□□ -0.46
COL8A2P25067 PHBP15-201ENST00000574228 665 ntBASIC12.15□□□□□ -0.46
COL8A2P25067 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.15□□□□□ -0.46
COL8A2P25067 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.15□□□□□ -0.46
COL8A2P25067 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.15□□□□□ -0.46
COL8A2P25067 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.15□□□□□ -0.46
COL8A2P25067 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
COL8A2P25067 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms