Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 AC064801.2-201ENST00000625052 1303 ntBASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 RPL35P9-201ENST00000446059 350 ntBASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 AC005740.1-201ENST00000515639 522 ntBASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 RNA5SP406-201ENST00000516106 112 ntBASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 LINC00244-201ENST00000625073 613 ntBASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.89□□□□□ -0.03
DNMT3BQ9UBC3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 RN7SL396P-201ENST00000471086 295 ntBASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 AC022447.6-201ENST00000515522 438 ntBASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 LINC00115-201ENST00000473798 1317 ntBASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
DNMT3BQ9UBC3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 AC021305.1-201ENST00000520656 1514 ntBASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.87□□□□□ -0.03
DNMT3BQ9UBC3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms