Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNRPFP62306 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNRPFP62306 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNRPFP62306 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.56■□□□□ 0.08
SNRPFP62306 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.56■□□□□ 0.08
SNRPFP62306 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.56■□□□□ 0.08
SNRPFP62306 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.56■□□□□ 0.08
SNRPFP62306 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 FRMPD2B-201ENST00000431305 1347 ntBASIC15.55■□□□□ 0.08
SNRPFP62306 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SNRPFP62306 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SNRPFP62306 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SNRPFP62306 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 RPS9P1-201ENST00000419943 583 ntBASIC15.55■□□□□ 0.08
SNRPFP62306 AC007274.1-201ENST00000439805 662 ntBASIC15.55■□□□□ 0.08
SNRPFP62306 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.55■□□□□ 0.08
SNRPFP62306 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.55■□□□□ 0.08
SNRPFP62306 POU5F1P2-201ENST00000521750 823 ntBASIC15.55■□□□□ 0.08
SNRPFP62306 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.55■□□□□ 0.08
SNRPFP62306 AC090857.1-201ENST00000527400 390 ntBASIC15.55■□□□□ 0.08
SNRPFP62306 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.55■□□□□ 0.08
SNRPFP62306 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.55■□□□□ 0.08
SNRPFP62306 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.55■□□□□ 0.08
SNRPFP62306 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.55■□□□□ 0.08
SNRPFP62306 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SNRPFP62306 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRPFP62306 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SNRPFP62306 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 AC023794.5-201ENST00000564380 2157 ntBASIC15.55■□□□□ 0.08
SNRPFP62306 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SNRPFP62306 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRPFP62306 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRPFP62306 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRPFP62306 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SNRPFP62306 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SNRPFP62306 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.54■□□□□ 0.08
SNRPFP62306 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.54■□□□□ 0.08
SNRPFP62306 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRPFP62306 AC041040.2-201ENST00000622926 2899 ntBASIC15.54■□□□□ 0.08
SNRPFP62306 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SNRPFP62306 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SNRPFP62306 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRPFP62306 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 AC117489.1-201ENST00000625169 3217 ntBASIC15.54■□□□□ 0.08
SNRPFP62306 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
SNRPFP62306 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 AC006987.1-201ENST00000413610 527 ntBASIC15.54■□□□□ 0.08
SNRPFP62306 BX679664.3-201ENST00000414070 555 ntBASIC15.54■□□□□ 0.08
SNRPFP62306 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRPFP62306 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SNRPFP62306 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.54■□□□□ 0.08
SNRPFP62306 AC113935.1-201ENST00000471722 555 ntBASIC15.54■□□□□ 0.08
SNRPFP62306 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRPFP62306 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SNRPFP62306 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.54■□□□□ 0.08
SNRPFP62306 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
SNRPFP62306 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRPFP62306 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms