Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP2B1P20020 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ATP2B1P20020 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ATP2B1P20020 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP2B1P20020 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2B1P20020 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 FAM21FP-201ENST00000426241 1131 ntBASIC16.67■□□□□ 0.26
ATP2B1P20020 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 AC027237.1-201ENST00000560942 655 ntBASIC16.67■□□□□ 0.26
ATP2B1P20020 MIR6752-201ENST00000618442 71 ntBASIC16.67■□□□□ 0.26
ATP2B1P20020 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2B1P20020 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2B1P20020 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2B1P20020 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2B1P20020 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2B1P20020 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATP2B1P20020 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP2B1P20020 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2B1P20020 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP2B1P20020 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATP2B1P20020 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.66■□□□□ 0.26
ATP2B1P20020 RPS2P32-201ENST00000439199 892 ntBASIC16.66■□□□□ 0.26
ATP2B1P20020 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2B1P20020 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2B1P20020 AC100827.2-201ENST00000563214 1194 ntBASIC16.66■□□□□ 0.26
ATP2B1P20020 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2B1P20020 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2B1P20020 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP2B1P20020 EEF1DP1-201ENST00000585891 896 ntBASIC16.66■□□□□ 0.26
ATP2B1P20020 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2B1P20020 AC132192.2-201ENST00000596206 1147 ntBASIC16.66■□□□□ 0.26
ATP2B1P20020 AC244157.2-201ENST00000616239 1006 ntBASIC16.66■□□□□ 0.26
ATP2B1P20020 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2B1P20020 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2B1P20020 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2B1P20020 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2B1P20020 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
ATP2B1P20020 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP2B1P20020 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2B1P20020 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2B1P20020 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms