Protein–RNA interactions for Protein: P17538

CTRB1, Chymotrypsinogen B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTRB1P17538 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CTRB1P17538 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.2□□□□□ -0.46
CTRB1P17538 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.2□□□□□ -0.46
CTRB1P17538 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.2□□□□□ -0.46
CTRB1P17538 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.2□□□□□ -0.46
CTRB1P17538 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.2□□□□□ -0.46
CTRB1P17538 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.2□□□□□ -0.46
CTRB1P17538 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.2□□□□□ -0.46
CTRB1P17538 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.2□□□□□ -0.46
CTRB1P17538 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CTRB1P17538 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC12.2□□□□□ -0.46
CTRB1P17538 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CTRB1P17538 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.2□□□□□ -0.46
CTRB1P17538 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.2□□□□□ -0.46
CTRB1P17538 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 NTM-206ENST00000427481 2583 ntTSL 5 BASIC12.2□□□□□ -0.46
CTRB1P17538 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CTRB1P17538 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.2□□□□□ -0.46
CTRB1P17538 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CTRB1P17538 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.19□□□□□ -0.46
CTRB1P17538 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 AC104457.1-201ENST00000401024 814 ntBASIC12.19□□□□□ -0.46
CTRB1P17538 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 AC055876.3-201ENST00000431496 288 ntBASIC12.19□□□□□ -0.46
CTRB1P17538 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.19□□□□□ -0.46
CTRB1P17538 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.19□□□□□ -0.46
CTRB1P17538 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.19□□□□□ -0.46
CTRB1P17538 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 AC009407.1-201ENST00000568958 598 ntBASIC12.19□□□□□ -0.46
CTRB1P17538 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.19□□□□□ -0.46
CTRB1P17538 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.19□□□□□ -0.46
CTRB1P17538 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 AC138649.4-201ENST00000612222 287 ntBASIC12.19□□□□□ -0.46
CTRB1P17538 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 KHSRPP1-201ENST00000427983 1768 ntBASIC12.19□□□□□ -0.46
CTRB1P17538 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CTRB1P17538 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CTRB1P17538 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.19□□□□□ -0.46
CTRB1P17538 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms