Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CLDN5O00501 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 KRT8P19-201ENST00000551916 1455 ntBASIC15.14■□□□□ 0.01
CLDN5O00501 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLDN5O00501 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 FAM45BP-202ENST00000592932 1624 ntBASIC15.14■□□□□ 0.01
CLDN5O00501 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN5O00501 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN5O00501 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN5O00501 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN5O00501 AC234782.1-201ENST00000451950 919 ntBASIC15.13■□□□□ 0.01
CLDN5O00501 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN5O00501 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN5O00501 RNA5SP423-201ENST00000517127 109 ntBASIC15.13■□□□□ 0.01
CLDN5O00501 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CLDN5O00501 MIR3677-201ENST00000578964 60 ntBASIC15.13■□□□□ 0.01
CLDN5O00501 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN5O00501 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDN5O00501 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 AC006453.1-201ENST00000636037 1257 ntBASIC15.13■□□□□ 0.01
CLDN5O00501 LINC01815-202ENST00000641468 1409 ntBASIC15.13■□□□□ 0.01
CLDN5O00501 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN5O00501 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 AC016397.2-201ENST00000624848 1985 ntBASIC15.13■□□□□ 0.01
CLDN5O00501 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN5O00501 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN5O00501 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLDN5O00501 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN5O00501 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN5O00501 MST1P2-201ENST00000457982 2291 ntBASIC15.12■□□□□ 0.01
CLDN5O00501 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN5O00501 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN5O00501 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN5O00501 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN5O00501 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN5O00501 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN5O00501 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN5O00501 KRT8P1-201ENST00000557533 1207 ntBASIC15.12■□□□□ 0.01
CLDN5O00501 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN5O00501 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.12■□□□□ 0.01
CLDN5O00501 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN5O00501 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN5O00501 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN5O00501 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms