Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC139712.1-201ENST00000378256 1875 ntBASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 SORD2P-201ENST00000558556 1069 ntBASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIN7CQ9NUP9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 AC015909.5-201ENST00000624336 2266 ntBASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 KHSRPP1-201ENST00000427983 1768 ntBASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 AC234783.1-201ENST00000441761 496 ntBASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 BCRP2-202ENST00000447763 634 ntBASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 AC106760.1-201ENST00000508690 800 ntBASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 BCRP6-201ENST00000510112 632 ntBASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 BCRP7-201ENST00000511549 544 ntBASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 AC145423.3-201ENST00000615987 467 ntBASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.06□□□□□ -0.48
LIN7CQ9NUP9 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 AC111170.3-201ENST00000624282 2464 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms