Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ALS2CL-203ENST00000415953 3471 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 PASK-215ENST00000544142 4724 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 AL163051.1-201ENST00000569214 1512 ntBASIC8.58□□□□□ -1.04
SVIPQ8NHG7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 RHOXF2B-201ENST00000371402 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 NCR1-205ENST00000594765 1612 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 TGS1-201ENST00000260129 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 PAMR1-206ENST00000615849 2801 ntTSL 2 BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SVIPQ8NHG7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 SLC7A7-215ENST00000555702 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 KIAA1683-207ENST00000600359 3871 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 GULP1-201ENST00000359135 3347 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 AL122008.3-201ENST00000412483 1723 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 THRB-AS1-205ENST00000609230 1318 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 ZSWIM1-202ENST00000372523 2769 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 BRF2-201ENST00000220659 2603 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 PHF8-204ENST00000357988 6024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 AL445933.1-201ENST00000434240 2242 ntBASIC8.57□□□□□ -1.04
SVIPQ8NHG7 TTC12-210ENST00000483239 2240 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 PLA2G2C-202ENST00000429261 3249 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 RHBDF1P1-201ENST00000427504 1941 ntBASIC8.57□□□□□ -1.04
SVIPQ8NHG7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 EFCAB11-201ENST00000316738 3095 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 C14orf159-211ENST00000518868 3075 ntAPPRIS ALT1 TSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 ARSF-202ENST00000381127 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 ANKRD20A5P-201ENST00000431648 3556 ntBASIC8.57□□□□□ -1.04
SVIPQ8NHG7 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 SEPT14P1-201ENST00000458703 648 ntBASIC8.57□□□□□ -1.04
SVIPQ8NHG7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.57□□□□□ -1.04
SVIPQ8NHG7 LINC01572-203ENST00000563823 563 ntTSL 4 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 AC040160.1-201ENST00000573063 2677 ntBASIC8.57□□□□□ -1.04
SVIPQ8NHG7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 TEKT3-202ENST00000395930 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 AC091078.3-201ENST00000556708 2284 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 L3MBTL2-201ENST00000216237 3296 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 CLDN19-203ENST00000539749 3517 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 CCDC18-201ENST00000343253 4867 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 KRT87P-202ENST00000534226 1464 ntBASIC8.57□□□□□ -1.04
SVIPQ8NHG7 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 PAMR1-208ENST00000621476 2842 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SVIPQ8NHG7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SVIPQ8NHG7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SVIPQ8NHG7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
SVIPQ8NHG7 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SVIPQ8NHG7 FP565260.7-201ENST00000623998 3634 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
SVIPQ8NHG7 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
SVIPQ8NHG7 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SVIPQ8NHG7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms