RNA–Protein interactions for RNA: ENST00000621476.4

PAMR1-208, Transcript of peptidase domain containing associated with muscle regeneration 1, humanhuman

TSL 2 BASIC

Gene PAMR1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAMR1-208ENST00000621476 NISCHQ9Y2I1 1504 aa21.35■■□□□ 1.01
PAMR1-208ENST00000621476 SHROOM4Q9ULL8 1493 aa18.5■□□□□ 0.55
PAMR1-208ENST00000621476 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
PAMR1-208ENST00000621476 HRCP23327 699 aa18.4■□□□□ 0.54
PAMR1-208ENST00000621476 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
PAMR1-208ENST00000621476 PCGF6Q9BYE7 350 aa18.25■□□□□ 0.51
PAMR1-208ENST00000621476 CCDC180Q9P1Z9 1646 aa18.15■□□□□ 0.5
PAMR1-208ENST00000621476 ZCCHC6Q5VYS8 1495 aaKnown RBP18.06■□□□□ 0.48
PAMR1-208ENST00000621476 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
PAMR1-208ENST00000621476 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
PAMR1-208ENST00000621476 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.43
PAMR1-208ENST00000621476 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
PAMR1-208ENST00000621476 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
PAMR1-208ENST00000621476 SCAF1Q9H7N4 1312 aaKnown RBP17.5■□□□□ 0.39
PAMR1-208ENST00000621476 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
PAMR1-208ENST00000621476 TRIM26Q12899 539 aaPredicted RBP17.45■□□□□ 0.38
PAMR1-208ENST00000621476 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
PAMR1-208ENST00000621476 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
PAMR1-208ENST00000621476 FAM9AQ8IZU1 332 aaPredicted RBP17.13■□□□□ 0.33
PAMR1-208ENST00000621476 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
PAMR1-208ENST00000621476 NEUROD1Q13562 356 aa17.06■□□□□ 0.32
PAMR1-208ENST00000621476 ABCC9O60706 1549 aa17.04■□□□□ 0.32
PAMR1-208ENST00000621476 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
PAMR1-208ENST00000621476 GTF3C3Q9Y5Q9 886 aa16.97■□□□□ 0.31
PAMR1-208ENST00000621476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
PAMR1-208ENST00000621476 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
PAMR1-208ENST00000621476 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
PAMR1-208ENST00000621476 CCER1Q8TC90 406 aaPredicted RBP16.84■□□□□ 0.29
PAMR1-208ENST00000621476 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
PAMR1-208ENST00000621476 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
PAMR1-208ENST00000621476 NACADO15069 1562 aa16.78■□□□□ 0.28
PAMR1-208ENST00000621476 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
PAMR1-208ENST00000621476 MYT1Q01538 1121 aa16.75■□□□□ 0.27
PAMR1-208ENST00000621476 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
PAMR1-208ENST00000621476 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
PAMR1-208ENST00000621476 CECR2Q9BXF3 1484 aa16.69■□□□□ 0.26
PAMR1-208ENST00000621476 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
PAMR1-208ENST00000621476 WIZO95785 1651 aa16.54■□□□□ 0.24
PAMR1-208ENST00000621476 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
PAMR1-208ENST00000621476 MIER1Q8N108 512 aa16.4■□□□□ 0.22
PAMR1-208ENST00000621476 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
PAMR1-208ENST00000621476 UNC13AQ9UPW8 1703 aa16.35■□□□□ 0.21
PAMR1-208ENST00000621476 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
PAMR1-208ENST00000621476 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
PAMR1-208ENST00000621476 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
PAMR1-208ENST00000621476 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
PAMR1-208ENST00000621476 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
PAMR1-208ENST00000621476 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
PAMR1-208ENST00000621476 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
PAMR1-208ENST00000621476 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
PAMR1-208ENST00000621476 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
PAMR1-208ENST00000621476 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
PAMR1-208ENST00000621476 SUPT16HQ9Y5B9 1047 aaKnown RBP16.09■□□□□ 0.17
PAMR1-208ENST00000621476 CEP162Q5TB80 1403 aa16.07■□□□□ 0.16
PAMR1-208ENST00000621476 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
PAMR1-208ENST00000621476 RANGAP1P46060 587 aaPredicted RBP16■□□□□ 0.15
PAMR1-208ENST00000621476 BCL11AQ9H165 835 aa16■□□□□ 0.15
PAMR1-208ENST00000621476 BCANQ96GW7 911 aa15.99■□□□□ 0.15
PAMR1-208ENST00000621476 SOGA1O94964 1423 aa15.99■□□□□ 0.15
PAMR1-208ENST00000621476 ANP32EQ9BTT0 268 aa15.98■□□□□ 0.15
PAMR1-208ENST00000621476 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
PAMR1-208ENST00000621476 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.14
PAMR1-208ENST00000621476 RUSC2Q8N2Y8 1516 aa15.93■□□□□ 0.14
PAMR1-208ENST00000621476 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
PAMR1-208ENST00000621476 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
PAMR1-208ENST00000621476 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
PAMR1-208ENST00000621476 KCNH8Q96L42 1107 aa15.86■□□□□ 0.13
PAMR1-208ENST00000621476 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
PAMR1-208ENST00000621476 EEA1Q15075 1411 aa15.81■□□□□ 0.12
PAMR1-208ENST00000621476 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
PAMR1-208ENST00000621476 APLP2Q06481 763 aa15.81■□□□□ 0.12
PAMR1-208ENST00000621476 FKBP8Q14318 412 aa15.76■□□□□ 0.11
PAMR1-208ENST00000621476 CLSPNQ9HAW4 1339 aa15.74■□□□□ 0.11
PAMR1-208ENST00000621476 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
PAMR1-208ENST00000621476 ITGAEP38570 1179 aa15.72■□□□□ 0.11
PAMR1-208ENST00000621476 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
PAMR1-208ENST00000621476 RBM19Q9Y4C8 960 aaKnown RBP15.65■□□□□ 0.1
PAMR1-208ENST00000621476 KIF21BO75037 1637 aa15.65■□□□□ 0.1
PAMR1-208ENST00000621476 CLIP1P30622 1438 aa15.65■□□□□ 0.1
PAMR1-208ENST00000621476 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
PAMR1-208ENST00000621476 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
PAMR1-208ENST00000621476 TOP2BQ02880 1626 aa15.6■□□□□ 0.09
PAMR1-208ENST00000621476 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
PAMR1-208ENST00000621476 DDX10Q13206 875 aaKnown RBP15.58■□□□□ 0.09
PAMR1-208ENST00000621476 NEFLP07196 543 aa15.56■□□□□ 0.08
PAMR1-208ENST00000621476 HIRIP3Q9BW71 556 aaPredicted RBP15.56■□□□□ 0.08
PAMR1-208ENST00000621476 VPS8Q8N3P4 1428 aa15.55■□□□□ 0.08
PAMR1-208ENST00000621476 NCAPD3P42695 1498 aa15.55■□□□□ 0.08
PAMR1-208ENST00000621476 HMGXB3Q12766 1538 aa15.54■□□□□ 0.08
PAMR1-208ENST00000621476 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
PAMR1-208ENST00000621476 KANK4Q5T7N3 995 aaPredicted RBP15.53■□□□□ 0.08
PAMR1-208ENST00000621476 MSH5O43196 834 aa15.52■□□□□ 0.08
PAMR1-208ENST00000621476 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
PAMR1-208ENST00000621476 CUX1P39880 1505 aa15.47■□□□□ 0.07
PAMR1-208ENST00000621476 ERICH6Q7L0X2 663 aa15.45■□□□□ 0.06
PAMR1-208ENST00000621476 CFTRP13569 1480 aa15.43■□□□□ 0.06
PAMR1-208ENST00000621476 PRXQ9BXM0 1461 aa15.43■□□□□ 0.06
PAMR1-208ENST00000621476 SIN3AQ96ST3 1273 aa15.41■□□□□ 0.06
PAMR1-208ENST00000621476 ERICH3Q5RHP9 1530 aa15.4■□□□□ 0.06
PAMR1-208ENST00000621476 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms