RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
CCDC18-201ENST00000343253 DCAF8L2P0C7V8 631 aa17.61■□□□□ 0.41
CCDC18-201ENST00000343253 MYT1Q01538 1121 aa17.29■□□□□ 0.36
CCDC18-201ENST00000343253 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
CCDC18-201ENST00000343253 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.33
CCDC18-201ENST00000343253 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
CCDC18-201ENST00000343253 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
CCDC18-201ENST00000343253 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
CCDC18-201ENST00000343253 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
CCDC18-201ENST00000343253 APLP2Q06481 763 aa16.7■□□□□ 0.26
CCDC18-201ENST00000343253 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
CCDC18-201ENST00000343253 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
CCDC18-201ENST00000343253 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
CCDC18-201ENST00000343253 NEFLP07196 543 aa16.48■□□□□ 0.23
CCDC18-201ENST00000343253 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
CCDC18-201ENST00000343253 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
CCDC18-201ENST00000343253 TTBK1Q5TCY1 1321 aaPredicted RBP16.18■□□□□ 0.18
CCDC18-201ENST00000343253 HRCP23327 699 aa16.06■□□□□ 0.16
CCDC18-201ENST00000343253 DAXXQ9UER7 740 aaPredicted RBP16.05■□□□□ 0.16
CCDC18-201ENST00000343253 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
CCDC18-201ENST00000343253 TRIM26Q12899 539 aaPredicted RBP15.94■□□□□ 0.14
CCDC18-201ENST00000343253 RTL5Q5HYW3 569 aaPredicted RBP15.88■□□□□ 0.13
CCDC18-201ENST00000343253 UBTFP17480 764 aaKnown RBP15.79■□□□□ 0.12
CCDC18-201ENST00000343253 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
CCDC18-201ENST00000343253 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
CCDC18-201ENST00000343253 ZNF316A6NFI3 1004 aaPredicted RBP15.63■□□□□ 0.09
CCDC18-201ENST00000343253 DIEXFQ68CQ4 756 aaKnown RBP15.59■□□□□ 0.09
CCDC18-201ENST00000343253 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
CCDC18-201ENST00000343253 GTF3C3Q9Y5Q9 886 aa15.5■□□□□ 0.07
CCDC18-201ENST00000343253 CLSPNQ9HAW4 1339 aa15.47■□□□□ 0.07
CCDC18-201ENST00000343253 POLR3GLQ9BT43 218 aa15.42■□□□□ 0.06
CCDC18-201ENST00000343253 CDK11AQ9UQ88 783 aaPredicted RBP15.41■□□□□ 0.06
CCDC18-201ENST00000343253 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
CCDC18-201ENST00000343253 ITGAEP38570 1179 aa15.33■□□□□ 0.04
CCDC18-201ENST00000343253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
CCDC18-201ENST00000343253 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
CCDC18-201ENST00000343253 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
CCDC18-201ENST00000343253 ACIN1Q9UKV3 1341 aaKnown RBP15.28■□□□□ 0.04
CCDC18-201ENST00000343253 BCANQ96GW7 911 aa15.28■□□□□ 0.04
CCDC18-201ENST00000343253 GLIPR1L2Q4G1C9 344 aa15.27■□□□□ 0.04
CCDC18-201ENST00000343253 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.03
CCDC18-201ENST00000343253 EIF5BO60841 1220 aaKnown RBP15.23■□□□□ 0.03
CCDC18-201ENST00000343253 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
CCDC18-201ENST00000343253 ANP32AP39687 249 aaKnown RBP15.2■□□□□ 0.02
CCDC18-201ENST00000343253 ANP32CO43423 234 aa15.16■□□□□ 0.02
CCDC18-201ENST00000343253 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
CCDC18-201ENST00000343253 ANP32BQ92688 251 aaKnown RBP15.05■□□□□ -0
CCDC18-201ENST00000343253 SLC4A1APQ9BWU0 796 aaKnown RBP15.01□□□□□ -0.01
CCDC18-201ENST00000343253 NEUROD1Q13562 356 aa14.92□□□□□ -0.02
CCDC18-201ENST00000343253 NPM2Q86SE8 214 aaKnown RBP14.9□□□□□ -0.02
CCDC18-201ENST00000343253 FAM50AQ14320 339 aaKnown RBP14.89□□□□□ -0.03
CCDC18-201ENST00000343253 CANXP27824 592 aaKnown RBP14.89□□□□□ -0.03
CCDC18-201ENST00000343253 FKBP8Q14318 412 aa14.88□□□□□ -0.03
CCDC18-201ENST00000343253 TRIM52Q96A61 297 aa14.87□□□□□ -0.03
CCDC18-201ENST00000343253 UPF2Q9HAU5 1272 aaKnown RBP14.82□□□□□ -0.04
CCDC18-201ENST00000343253 HSP90AA1P07900 732 aaKnown RBP14.79□□□□□ -0.04
CCDC18-201ENST00000343253 NBR1Q14596 966 aa14.76□□□□□ -0.05
CCDC18-201ENST00000343253 NEFMP07197 916 aa14.74□□□□□ -0.05
CCDC18-201ENST00000343253 ZNF326Q5BKZ1 582 aaKnown RBP14.72□□□□□ -0.05
CCDC18-201ENST00000343253 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
CCDC18-201ENST00000343253 HNRNPUQ00839 825 aaKnown RBP eCLIP14.69□□□□□ -0.06
CCDC18-201ENST00000343253 ANP32EQ9BTT0 268 aa14.69□□□□□ -0.06
CCDC18-201ENST00000343253 CCDC136Q96JN2 1154 aa14.68□□□□□ -0.06
CCDC18-201ENST00000343253 TNNT2P45379 298 aaPredicted RBP14.67□□□□□ -0.06
CCDC18-201ENST00000343253 BCL11AQ9H165 835 aa14.65□□□□□ -0.06
CCDC18-201ENST00000343253 ERICH6BQ5W0A0 696 aa14.61□□□□□ -0.07
CCDC18-201ENST00000343253 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.6□□□□□ -0.07
CCDC18-201ENST00000343253 TRIM44Q96DX7 344 aaPredicted RBP14.58□□□□□ -0.08
CCDC18-201ENST00000343253 DDRGK1Q96HY6 314 aa14.56□□□□□ -0.08
CCDC18-201ENST00000343253 ARXQ96QS3 562 aa14.54□□□□□ -0.08
CCDC18-201ENST00000343253 DDX10Q13206 875 aaKnown RBP14.53□□□□□ -0.08
CCDC18-201ENST00000343253 FAM9BQ8IZU0 186 aa14.52□□□□□ -0.08
CCDC18-201ENST00000343253 TONSLQ96HA7 1378 aa14.5□□□□□ -0.09
CCDC18-201ENST00000343253 SLC24A1O60721 1099 aa14.5□□□□□ -0.09
CCDC18-201ENST00000343253 PPM1GO15355 546 aaPredicted RBP14.5□□□□□ -0.09
CCDC18-201ENST00000343253 BECN1Q14457 450 aa14.5□□□□□ -0.09
CCDC18-201ENST00000343253 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
CCDC18-201ENST00000343253 TMC1Q8TDI8 760 aa14.46□□□□□ -0.1
CCDC18-201ENST00000343253 GOLGA6L22H0YM25 854 aa14.45□□□□□ -0.1
CCDC18-201ENST00000343253 MIER1Q8N108 512 aa14.43□□□□□ -0.1
CCDC18-201ENST00000343253 MRS2Q9HD23 443 aa14.41□□□□□ -0.1
CCDC18-201ENST00000343253 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.11
CCDC18-201ENST00000343253 NCLP19338 710 aaKnown RBP14.39□□□□□ -0.11
CCDC18-201ENST00000343253 NAP1L5Q96NT1 182 aaPredicted RBP14.39□□□□□ -0.11
CCDC18-201ENST00000343253 CDK11BP21127 795 aaKnown RBP14.38□□□□□ -0.11
CCDC18-201ENST00000343253 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
CCDC18-201ENST00000343253 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
CCDC18-201ENST00000343253 PTMAP06454 111 aaKnown RBP14.34□□□□□ -0.11
CCDC18-201ENST00000343253 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
CCDC18-201ENST00000343253 DNTTIP2Q5QJE6 756 aaKnown RBP14.33□□□□□ -0.12
CCDC18-201ENST00000343253 WDR43Q15061 677 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCDC18-201ENST00000343253 RTN4Q9NQC3 1192 aaKnown RBP14.3□□□□□ -0.12
CCDC18-201ENST00000343253 NOP58Q9Y2X3 529 aaKnown RBP14.3□□□□□ -0.12
CCDC18-201ENST00000343253 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
CCDC18-201ENST00000343253 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
CCDC18-201ENST00000343253 PPP4R2Q9NY27 417 aa14.24□□□□□ -0.13
CCDC18-201ENST00000343253 DEKP35659 375 aaKnown RBP14.23□□□□□ -0.13
CCDC18-201ENST00000343253 ZRSR1Q15695 479 aaKnown RBP14.2□□□□□ -0.14
CCDC18-201ENST00000343253 L1TD1Q5T7N2 865 aaKnown RBP14.2□□□□□ -0.14
CCDC18-201ENST00000343253 LAS1LQ9Y4W2 734 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms