RNA–Protein interactions for RNA: ENST00000539749.5

CLDN19-203, Transcript of claudin 19, humanhuman

TSL 2 BASIC

Gene CLDN19, Length 3,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19-203ENST00000539749 NISCHQ9Y2I1 1504 aa22.18■■□□□ 1.14
CLDN19-203ENST00000539749 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
CLDN19-203ENST00000539749 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
CLDN19-203ENST00000539749 DCAF8L2P0C7V8 631 aa18.82■□□□□ 0.6
CLDN19-203ENST00000539749 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
CLDN19-203ENST00000539749 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
CLDN19-203ENST00000539749 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
CLDN19-203ENST00000539749 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
CLDN19-203ENST00000539749 ABCC9O60706 1549 aa18.13■□□□□ 0.49
CLDN19-203ENST00000539749 NACADO15069 1562 aa18.11■□□□□ 0.49
CLDN19-203ENST00000539749 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
CLDN19-203ENST00000539749 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
CLDN19-203ENST00000539749 CHIC1Q5VXU3 224 aa17.8■□□□□ 0.44
CLDN19-203ENST00000539749 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
CLDN19-203ENST00000539749 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
CLDN19-203ENST00000539749 SCRIBQ14160 1630 aa17.73■□□□□ 0.43
CLDN19-203ENST00000539749 BICRAQ9NZM4 1560 aa17.67■□□□□ 0.42
CLDN19-203ENST00000539749 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
CLDN19-203ENST00000539749 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
CLDN19-203ENST00000539749 PPARGC1BQ86YN6 1023 aaKnown RBP17.46■□□□□ 0.39
CLDN19-203ENST00000539749 HRCP23327 699 aa17.38■□□□□ 0.37
CLDN19-203ENST00000539749 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
CLDN19-203ENST00000539749 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
CLDN19-203ENST00000539749 SMARCA4P51532 1647 aa17.16■□□□□ 0.34
CLDN19-203ENST00000539749 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.33
CLDN19-203ENST00000539749 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.33
CLDN19-203ENST00000539749 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
CLDN19-203ENST00000539749 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
CLDN19-203ENST00000539749 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
CLDN19-203ENST00000539749 WIZO95785 1651 aa17.03■□□□□ 0.32
CLDN19-203ENST00000539749 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
CLDN19-203ENST00000539749 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
CLDN19-203ENST00000539749 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
CLDN19-203ENST00000539749 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
CLDN19-203ENST00000539749 HMGXB3Q12766 1538 aa16.77■□□□□ 0.27
CLDN19-203ENST00000539749 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
CLDN19-203ENST00000539749 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
CLDN19-203ENST00000539749 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
CLDN19-203ENST00000539749 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
CLDN19-203ENST00000539749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
CLDN19-203ENST00000539749 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
CLDN19-203ENST00000539749 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.25
CLDN19-203ENST00000539749 UBTFP17480 764 aaKnown RBP16.6■□□□□ 0.25
CLDN19-203ENST00000539749 PRDM2Q13029 1718 aa16.58■□□□□ 0.25
CLDN19-203ENST00000539749 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
CLDN19-203ENST00000539749 CCDC88BA6NC98 1476 aa16.53■□□□□ 0.24
CLDN19-203ENST00000539749 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
CLDN19-203ENST00000539749 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
CLDN19-203ENST00000539749 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
CLDN19-203ENST00000539749 YTHDC1Q96MU7 727 aaKnown RBP16.28■□□□□ 0.2
CLDN19-203ENST00000539749 SOGA1O94964 1423 aa16.28■□□□□ 0.2
CLDN19-203ENST00000539749 CFTRP13569 1480 aa16.26■□□□□ 0.19
CLDN19-203ENST00000539749 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
CLDN19-203ENST00000539749 APLP2Q06481 763 aa16.23■□□□□ 0.19
CLDN19-203ENST00000539749 BIVM-ERCC5R4GMW8 1640 aa16.22■□□□□ 0.19
CLDN19-203ENST00000539749 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
CLDN19-203ENST00000539749 DIEXFQ68CQ4 756 aaKnown RBP16.19■□□□□ 0.18
CLDN19-203ENST00000539749 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
CLDN19-203ENST00000539749 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
CLDN19-203ENST00000539749 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
CLDN19-203ENST00000539749 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
CLDN19-203ENST00000539749 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
CLDN19-203ENST00000539749 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
CLDN19-203ENST00000539749 TOP2BQ02880 1626 aa16.1■□□□□ 0.17
CLDN19-203ENST00000539749 ITGAEP38570 1179 aa16.09■□□□□ 0.17
CLDN19-203ENST00000539749 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
CLDN19-203ENST00000539749 NESP48681 1621 aa16.05■□□□□ 0.16
CLDN19-203ENST00000539749 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
CLDN19-203ENST00000539749 CUX1P39880 1505 aa16.04■□□□□ 0.16
CLDN19-203ENST00000539749 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
CLDN19-203ENST00000539749 GTF3C3Q9Y5Q9 886 aa16.01■□□□□ 0.15
CLDN19-203ENST00000539749 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
CLDN19-203ENST00000539749 CENPBP07199 599 aaPredicted RBP16■□□□□ 0.15
CLDN19-203ENST00000539749 ATP1B4Q9UN42 357 aaPredicted RBP15.99■□□□□ 0.15
CLDN19-203ENST00000539749 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
CLDN19-203ENST00000539749 ACIN1Q9UKV3 1341 aaKnown RBP15.97■□□□□ 0.15
CLDN19-203ENST00000539749 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
CLDN19-203ENST00000539749 GOLGA3Q08378 1498 aa15.92■□□□□ 0.14
CLDN19-203ENST00000539749 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
CLDN19-203ENST00000539749 CLIP1P30622 1438 aa15.91■□□□□ 0.14
CLDN19-203ENST00000539749 ZNF316A6NFI3 1004 aaPredicted RBP15.91■□□□□ 0.14
CLDN19-203ENST00000539749 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
CLDN19-203ENST00000539749 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
CLDN19-203ENST00000539749 WDR62O43379 1518 aa15.86■□□□□ 0.13
CLDN19-203ENST00000539749 TARBP1Q13395 1621 aaKnown RBP15.84■□□□□ 0.13
CLDN19-203ENST00000539749 MIER1Q8N108 512 aa15.84■□□□□ 0.13
CLDN19-203ENST00000539749 TOPBP1Q92547 1522 aa15.82■□□□□ 0.12
CLDN19-203ENST00000539749 P3H3Q8IVL6 736 aa15.81■□□□□ 0.12
CLDN19-203ENST00000539749 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
CLDN19-203ENST00000539749 EEA1Q15075 1411 aa15.8■□□□□ 0.12
CLDN19-203ENST00000539749 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
CLDN19-203ENST00000539749 ABCA5Q8WWZ7 1642 aa15.78■□□□□ 0.12
CLDN19-203ENST00000539749 KANK4Q5T7N3 995 aaPredicted RBP15.74■□□□□ 0.11
CLDN19-203ENST00000539749 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
CLDN19-203ENST00000539749 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
CLDN19-203ENST00000539749 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
CLDN19-203ENST00000539749 MRC2Q9UBG0 1479 aa15.71■□□□□ 0.11
CLDN19-203ENST00000539749 KIF21BO75037 1637 aa15.71■□□□□ 0.11
CLDN19-203ENST00000539749 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
CLDN19-203ENST00000539749 CUX2O14529 1486 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms