RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
RNU6ATAC39P-201ENST00000516309 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
RNU6ATAC39P-201ENST00000516309 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
RNU6ATAC39P-201ENST00000516309 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
RNU6ATAC39P-201ENST00000516309 PHF23Q9BUL5 403 aaPredicted RBP16.2■□□□□ 0.18
RNU6ATAC39P-201ENST00000516309 FOXD1Q16676 465 aa15.65■□□□□ 0.1
RNU6ATAC39P-201ENST00000516309 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
RNU6ATAC39P-201ENST00000516309 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
RNU6ATAC39P-201ENST00000516309 SLC24A1O60721 1099 aa15.08■□□□□ 0
RNU6ATAC39P-201ENST00000516309 MSH5O43196 834 aa14.89□□□□□ -0.03
RNU6ATAC39P-201ENST00000516309 KCNA4P22459 653 aa14.68□□□□□ -0.06
RNU6ATAC39P-201ENST00000516309 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
RNU6ATAC39P-201ENST00000516309 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
RNU6ATAC39P-201ENST00000516309 PIAS4Q8N2W9 510 aaPredicted RBP14.24□□□□□ -0.13
RNU6ATAC39P-201ENST00000516309 AMER1Q5JTC6 1135 aaPredicted RBP14.23□□□□□ -0.13
RNU6ATAC39P-201ENST00000516309 RTN4Q9NQC3 1192 aaKnown RBP14.21□□□□□ -0.13
RNU6ATAC39P-201ENST00000516309 ADRA2BP18089 450 aa14.11□□□□□ -0.15
RNU6ATAC39P-201ENST00000516309 PPP6R1Q9UPN7 881 aa13.84□□□□□ -0.19
RNU6ATAC39P-201ENST00000516309 NCBP3Q53F19 620 aaKnown RBP13.6□□□□□ -0.23
RNU6ATAC39P-201ENST00000516309 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
RNU6ATAC39P-201ENST00000516309 CACNB1Q02641 598 aaPredicted RBP13.51□□□□□ -0.25
RNU6ATAC39P-201ENST00000516309 ZBTB22O15209 634 aa13.5□□□□□ -0.25
RNU6ATAC39P-201ENST00000516309 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
RNU6ATAC39P-201ENST00000516309 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
RNU6ATAC39P-201ENST00000516309 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
RNU6ATAC39P-201ENST00000516309 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
RNU6ATAC39P-201ENST00000516309 FKBP8Q14318 412 aa13.09□□□□□ -0.31
RNU6ATAC39P-201ENST00000516309 BCANQ96GW7 911 aa13.09□□□□□ -0.31
RNU6ATAC39P-201ENST00000516309 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
RNU6ATAC39P-201ENST00000516309 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
RNU6ATAC39P-201ENST00000516309 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
RNU6ATAC39P-201ENST00000516309 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
RNU6ATAC39P-201ENST00000516309 HAP1P54257 671 aaPredicted RBP12.89□□□□□ -0.35
RNU6ATAC39P-201ENST00000516309 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
RNU6ATAC39P-201ENST00000516309 ARXQ96QS3 562 aa12.84□□□□□ -0.35
RNU6ATAC39P-201ENST00000516309 TPRNQ4KMQ1 711 aa12.78□□□□□ -0.36
RNU6ATAC39P-201ENST00000516309 POTEHQ6S545 545 aa12.74□□□□□ -0.37
RNU6ATAC39P-201ENST00000516309 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
RNU6ATAC39P-201ENST00000516309 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
RNU6ATAC39P-201ENST00000516309 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
RNU6ATAC39P-201ENST00000516309 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
RNU6ATAC39P-201ENST00000516309 SCAF1Q9H7N4 1312 aaKnown RBP12.58□□□□□ -0.4
RNU6ATAC39P-201ENST00000516309 ATXN8OSP0DMR3 200 aa12.57□□□□□ -0.4
RNU6ATAC39P-201ENST00000516309 TULP1O00294 542 aaPredicted RBP12.56□□□□□ -0.4
RNU6ATAC39P-201ENST00000516309 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
RNU6ATAC39P-201ENST00000516309 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
RNU6ATAC39P-201ENST00000516309 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
RNU6ATAC39P-201ENST00000516309 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
RNU6ATAC39P-201ENST00000516309 GTF3C3Q9Y5Q9 886 aa12.41□□□□□ -0.42
RNU6ATAC39P-201ENST00000516309 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
RNU6ATAC39P-201ENST00000516309 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
RNU6ATAC39P-201ENST00000516309 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
RNU6ATAC39P-201ENST00000516309 RANGAP1P46060 587 aaPredicted RBP12.32□□□□□ -0.44
RNU6ATAC39P-201ENST00000516309 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
RNU6ATAC39P-201ENST00000516309 RNF216Q9NWF9 866 aaPredicted RBP12.28□□□□□ -0.44
RNU6ATAC39P-201ENST00000516309 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.26□□□□□ -0.45
RNU6ATAC39P-201ENST00000516309 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
RNU6ATAC39P-201ENST00000516309 FBLN2P98095 1184 aa12.24□□□□□ -0.45
RNU6ATAC39P-201ENST00000516309 BBXQ8WY36 941 aaPredicted RBP12.16□□□□□ -0.46
RNU6ATAC39P-201ENST00000516309 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 NBR1Q14596 966 aa12.1□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 PKD2Q13563 968 aa12.06□□□□□ -0.48
RNU6ATAC39P-201ENST00000516309 HOXD11P31277 338 aaPredicted RBP12.05□□□□□ -0.48
RNU6ATAC39P-201ENST00000516309 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
RNU6ATAC39P-201ENST00000516309 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
RNU6ATAC39P-201ENST00000516309 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
RNU6ATAC39P-201ENST00000516309 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 SPRYD3Q8NCJ5 442 aa11.94□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 APLP2Q06481 763 aa11.86□□□□□ -0.51
RNU6ATAC39P-201ENST00000516309 ATF5Q9Y2D1 282 aaPredicted RBP11.85□□□□□ -0.51
RNU6ATAC39P-201ENST00000516309 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
RNU6ATAC39P-201ENST00000516309 MYT1Q01538 1121 aa11.82□□□□□ -0.52
RNU6ATAC39P-201ENST00000516309 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
RNU6ATAC39P-201ENST00000516309 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
RNU6ATAC39P-201ENST00000516309 PROM2Q8N271 834 aa11.75□□□□□ -0.53
RNU6ATAC39P-201ENST00000516309 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
RNU6ATAC39P-201ENST00000516309 SUPT5HO00267 1087 aaKnown RBP11.7□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 SPOCK2Q92563 424 aa11.65□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 RGL2O15211 777 aa11.61□□□□□ -0.55
RNU6ATAC39P-201ENST00000516309 CHGAP10645 457 aaKnown RBP11.57□□□□□ -0.56
RNU6ATAC39P-201ENST00000516309 DSG3P32926 999 aa11.54□□□□□ -0.56
RNU6ATAC39P-201ENST00000516309 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
RNU6ATAC39P-201ENST00000516309 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
RNU6ATAC39P-201ENST00000516309 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
RNU6ATAC39P-201ENST00000516309 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
RNU6ATAC39P-201ENST00000516309 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
RNU6ATAC39P-201ENST00000516309 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
RNU6ATAC39P-201ENST00000516309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.59
RNU6ATAC39P-201ENST00000516309 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
RNU6ATAC39P-201ENST00000516309 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms