RNA–Protein interactions for RNA: ENST00000498273.1

L1TD1-201, Transcript of LINE1 type transposase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene L1TD1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
L1TD1-201ENST00000498273 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
L1TD1-201ENST00000498273 CCDC180Q9P1Z9 1646 aa15.08■□□□□ 0
L1TD1-201ENST00000498273 ZCCHC6Q5VYS8 1495 aaKnown RBP14.71□□□□□ -0.05
L1TD1-201ENST00000498273 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
L1TD1-201ENST00000498273 DCAF1Q9Y4B6 1507 aa14.42□□□□□ -0.1
L1TD1-201ENST00000498273 SHROOM4Q9ULL8 1493 aa14.13□□□□□ -0.15
L1TD1-201ENST00000498273 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
L1TD1-201ENST00000498273 ABCC9O60706 1549 aa13.86□□□□□ -0.19
L1TD1-201ENST00000498273 NACADO15069 1562 aa13.83□□□□□ -0.2
L1TD1-201ENST00000498273 SCRIBQ14160 1630 aa13.8□□□□□ -0.2
L1TD1-201ENST00000498273 UNC13AQ9UPW8 1703 aa13.73□□□□□ -0.21
L1TD1-201ENST00000498273 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
L1TD1-201ENST00000498273 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
L1TD1-201ENST00000498273 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.23
L1TD1-201ENST00000498273 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
L1TD1-201ENST00000498273 MYT1Q01538 1121 aa13.5□□□□□ -0.25
L1TD1-201ENST00000498273 CECR2Q9BXF3 1484 aa13.5□□□□□ -0.25
L1TD1-201ENST00000498273 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
L1TD1-201ENST00000498273 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.26
L1TD1-201ENST00000498273 WIZO95785 1651 aa13.42□□□□□ -0.26
L1TD1-201ENST00000498273 CHIC1Q5VXU3 224 aa13.42□□□□□ -0.26
L1TD1-201ENST00000498273 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
L1TD1-201ENST00000498273 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
L1TD1-201ENST00000498273 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
L1TD1-201ENST00000498273 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
L1TD1-201ENST00000498273 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
L1TD1-201ENST00000498273 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
L1TD1-201ENST00000498273 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
L1TD1-201ENST00000498273 TTBK1Q5TCY1 1321 aaPredicted RBP13.22□□□□□ -0.29
L1TD1-201ENST00000498273 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
L1TD1-201ENST00000498273 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
L1TD1-201ENST00000498273 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
L1TD1-201ENST00000498273 PRKCSHP14314 528 aaPredicted RBP13.09□□□□□ -0.31
L1TD1-201ENST00000498273 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
L1TD1-201ENST00000498273 PLPPR3Q6T4P5 718 aa12.94□□□□□ -0.34
L1TD1-201ENST00000498273 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
L1TD1-201ENST00000498273 ABCC8Q09428 1581 aa12.92□□□□□ -0.34
L1TD1-201ENST00000498273 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
L1TD1-201ENST00000498273 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
L1TD1-201ENST00000498273 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
L1TD1-201ENST00000498273 HMGXB3Q12766 1538 aa12.83□□□□□ -0.36
L1TD1-201ENST00000498273 APLP2Q06481 763 aa12.83□□□□□ -0.36
L1TD1-201ENST00000498273 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
L1TD1-201ENST00000498273 NCAPD3P42695 1498 aa12.77□□□□□ -0.37
L1TD1-201ENST00000498273 BAZ1BQ9UIG0 1483 aaKnown RBP12.76□□□□□ -0.37
L1TD1-201ENST00000498273 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
L1TD1-201ENST00000498273 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
L1TD1-201ENST00000498273 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
L1TD1-201ENST00000498273 NCBP3Q53F19 620 aaKnown RBP12.71□□□□□ -0.37
L1TD1-201ENST00000498273 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.37
L1TD1-201ENST00000498273 SOGA1O94964 1423 aa12.68□□□□□ -0.38
L1TD1-201ENST00000498273 TOP2BQ02880 1626 aa12.68□□□□□ -0.38
L1TD1-201ENST00000498273 WRNQ14191 1432 aaPredicted RBP eCLIP12.63□□□□□ -0.39
L1TD1-201ENST00000498273 KIF21BO75037 1637 aa12.61□□□□□ -0.39
L1TD1-201ENST00000498273 CFTRP13569 1480 aa12.6□□□□□ -0.39
L1TD1-201ENST00000498273 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
L1TD1-201ENST00000498273 CUX1P39880 1505 aa12.57□□□□□ -0.4
L1TD1-201ENST00000498273 EEA1Q15075 1411 aa12.56□□□□□ -0.4
L1TD1-201ENST00000498273 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
L1TD1-201ENST00000498273 HRCP23327 699 aa12.5□□□□□ -0.41
L1TD1-201ENST00000498273 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
L1TD1-201ENST00000498273 TNIKQ9UKE5 1360 aa12.48□□□□□ -0.41
L1TD1-201ENST00000498273 RANGAP1P46060 587 aaPredicted RBP12.47□□□□□ -0.41
L1TD1-201ENST00000498273 EIF5BO60841 1220 aaKnown RBP12.45□□□□□ -0.42
L1TD1-201ENST00000498273 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
L1TD1-201ENST00000498273 GOLGA3Q08378 1498 aa12.44□□□□□ -0.42
L1TD1-201ENST00000498273 PRXQ9BXM0 1461 aa12.43□□□□□ -0.42
L1TD1-201ENST00000498273 TRIM26Q12899 539 aaPredicted RBP12.42□□□□□ -0.42
L1TD1-201ENST00000498273 RAPGEF2Q9Y4G8 1499 aa12.41□□□□□ -0.42
L1TD1-201ENST00000498273 ERICH3Q5RHP9 1530 aa12.41□□□□□ -0.42
L1TD1-201ENST00000498273 CEP164Q9UPV0 1460 aa12.4□□□□□ -0.42
L1TD1-201ENST00000498273 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
L1TD1-201ENST00000498273 WDR97A6NE52 1622 aa12.39□□□□□ -0.43
L1TD1-201ENST00000498273 CADPSQ9ULU8 1353 aa12.36□□□□□ -0.43
L1TD1-201ENST00000498273 AMER1Q5JTC6 1135 aaPredicted RBP12.34□□□□□ -0.43
L1TD1-201ENST00000498273 TIMELESSQ9UNS1 1208 aa12.32□□□□□ -0.44
L1TD1-201ENST00000498273 ARXQ96QS3 562 aa12.29□□□□□ -0.44
L1TD1-201ENST00000498273 NESP48681 1621 aa12.29□□□□□ -0.44
L1TD1-201ENST00000498273 DNMBPQ6XZF7 1577 aa12.29□□□□□ -0.44
L1TD1-201ENST00000498273 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
L1TD1-201ENST00000498273 ARAP1Q96P48 1450 aa12.28□□□□□ -0.44
L1TD1-201ENST00000498273 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.45
L1TD1-201ENST00000498273 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
L1TD1-201ENST00000498273 FANCD2Q9BXW9 1451 aa12.25□□□□□ -0.45
L1TD1-201ENST00000498273 TULP1O00294 542 aaPredicted RBP12.24□□□□□ -0.45
L1TD1-201ENST00000498273 CLIP1P30622 1438 aa12.23□□□□□ -0.45
L1TD1-201ENST00000498273 PPARGC1BQ86YN6 1023 aaKnown RBP12.23□□□□□ -0.45
L1TD1-201ENST00000498273 TOPBP1Q92547 1522 aa12.23□□□□□ -0.45
L1TD1-201ENST00000498273 DNAJC5BQ9UF47 199 aa12.22□□□□□ -0.45
L1TD1-201ENST00000498273 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
L1TD1-201ENST00000498273 VPS8Q8N3P4 1428 aa12.22□□□□□ -0.45
L1TD1-201ENST00000498273 ABCA5Q8WWZ7 1642 aa12.22□□□□□ -0.45
L1TD1-201ENST00000498273 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.45
L1TD1-201ENST00000498273 IGF1RP08069 1367 aa12.21□□□□□ -0.45
L1TD1-201ENST00000498273 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
L1TD1-201ENST00000498273 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
L1TD1-201ENST00000498273 TARBP1Q13395 1621 aaKnown RBP12.18□□□□□ -0.46
L1TD1-201ENST00000498273 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
L1TD1-201ENST00000498273 CUX2O14529 1486 aa12.15□□□□□ -0.46
L1TD1-201ENST00000498273 KCNA4P22459 653 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms