RNA–Protein interactions for RNA: ENST00000372523.1

ZSWIM1-202, Transcript of zinc finger SWIM-type containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZSWIM1, Length 2,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1-202ENST00000372523 NISCHQ9Y2I1 1504 aa19.83■□□□□ 0.76
ZSWIM1-202ENST00000372523 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
ZSWIM1-202ENST00000372523 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
ZSWIM1-202ENST00000372523 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
ZSWIM1-202ENST00000372523 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
ZSWIM1-202ENST00000372523 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
ZSWIM1-202ENST00000372523 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
ZSWIM1-202ENST00000372523 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.26
ZSWIM1-202ENST00000372523 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
ZSWIM1-202ENST00000372523 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
ZSWIM1-202ENST00000372523 HRCP23327 699 aa16.53■□□□□ 0.24
ZSWIM1-202ENST00000372523 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
ZSWIM1-202ENST00000372523 CCDC180Q9P1Z9 1646 aa16.41■□□□□ 0.22
ZSWIM1-202ENST00000372523 FAM9AQ8IZU1 332 aaPredicted RBP16.28■□□□□ 0.2
ZSWIM1-202ENST00000372523 TRIM41Q8WV44 630 aa16.02■□□□□ 0.15
ZSWIM1-202ENST00000372523 SCRIBQ14160 1630 aa16■□□□□ 0.15
ZSWIM1-202ENST00000372523 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
ZSWIM1-202ENST00000372523 DCAF1Q9Y4B6 1507 aa15.96■□□□□ 0.15
ZSWIM1-202ENST00000372523 RSF1Q96T23 1441 aaPredicted RBP15.91■□□□□ 0.14
ZSWIM1-202ENST00000372523 TTBK1Q5TCY1 1321 aaPredicted RBP15.88■□□□□ 0.13
ZSWIM1-202ENST00000372523 RB1CC1Q8TDY2 1594 aa15.82■□□□□ 0.12
ZSWIM1-202ENST00000372523 ABCC9O60706 1549 aa15.8■□□□□ 0.12
ZSWIM1-202ENST00000372523 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.12
ZSWIM1-202ENST00000372523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.68■□□□□ 0.1
ZSWIM1-202ENST00000372523 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
ZSWIM1-202ENST00000372523 WIZO95785 1651 aa15.55■□□□□ 0.08
ZSWIM1-202ENST00000372523 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
ZSWIM1-202ENST00000372523 CCER1Q8TC90 406 aaPredicted RBP15.5■□□□□ 0.07
ZSWIM1-202ENST00000372523 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
ZSWIM1-202ENST00000372523 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
ZSWIM1-202ENST00000372523 RANGAP1P46060 587 aaPredicted RBP15.39■□□□□ 0.05
ZSWIM1-202ENST00000372523 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
ZSWIM1-202ENST00000372523 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
ZSWIM1-202ENST00000372523 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
ZSWIM1-202ENST00000372523 SOGA1O94964 1423 aa15.32■□□□□ 0.04
ZSWIM1-202ENST00000372523 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
ZSWIM1-202ENST00000372523 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
ZSWIM1-202ENST00000372523 NACADO15069 1562 aa15.26■□□□□ 0.03
ZSWIM1-202ENST00000372523 DIEXFQ68CQ4 756 aaKnown RBP15.23■□□□□ 0.03
ZSWIM1-202ENST00000372523 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
ZSWIM1-202ENST00000372523 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
ZSWIM1-202ENST00000372523 CEP162Q5TB80 1403 aa15.18■□□□□ 0.02
ZSWIM1-202ENST00000372523 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
ZSWIM1-202ENST00000372523 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
ZSWIM1-202ENST00000372523 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
ZSWIM1-202ENST00000372523 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
ZSWIM1-202ENST00000372523 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
ZSWIM1-202ENST00000372523 SMARCA2P51531 1590 aa15.07■□□□□ 0
ZSWIM1-202ENST00000372523 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
ZSWIM1-202ENST00000372523 SMARCA4P51532 1647 aa15.04■□□□□ -0
ZSWIM1-202ENST00000372523 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
ZSWIM1-202ENST00000372523 MIER1Q8N108 512 aa14.99□□□□□ -0.01
ZSWIM1-202ENST00000372523 ZNF316A6NFI3 1004 aaPredicted RBP14.97□□□□□ -0.01
ZSWIM1-202ENST00000372523 UNC13AQ9UPW8 1703 aa14.96□□□□□ -0.02
ZSWIM1-202ENST00000372523 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
ZSWIM1-202ENST00000372523 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
ZSWIM1-202ENST00000372523 GOLGA3Q08378 1498 aa14.87□□□□□ -0.03
ZSWIM1-202ENST00000372523 ITGAEP38570 1179 aa14.87□□□□□ -0.03
ZSWIM1-202ENST00000372523 APLP2Q06481 763 aa14.86□□□□□ -0.03
ZSWIM1-202ENST00000372523 SYNJ1O43426 1573 aa14.86□□□□□ -0.03
ZSWIM1-202ENST00000372523 CLIP1P30622 1438 aa14.85□□□□□ -0.03
ZSWIM1-202ENST00000372523 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
ZSWIM1-202ENST00000372523 RAPGEF2Q9Y4G8 1499 aa14.84□□□□□ -0.03
ZSWIM1-202ENST00000372523 KANK4Q5T7N3 995 aaPredicted RBP14.81□□□□□ -0.04
ZSWIM1-202ENST00000372523 BICRAQ9NZM4 1560 aa14.8□□□□□ -0.04
ZSWIM1-202ENST00000372523 EEA1Q15075 1411 aa14.74□□□□□ -0.05
ZSWIM1-202ENST00000372523 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
ZSWIM1-202ENST00000372523 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
ZSWIM1-202ENST00000372523 VPS8Q8N3P4 1428 aa14.7□□□□□ -0.06
ZSWIM1-202ENST00000372523 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
ZSWIM1-202ENST00000372523 KCNH8Q96L42 1107 aa14.67□□□□□ -0.06
ZSWIM1-202ENST00000372523 KIF21BO75037 1637 aa14.66□□□□□ -0.06
ZSWIM1-202ENST00000372523 P3H3Q8IVL6 736 aa14.64□□□□□ -0.07
ZSWIM1-202ENST00000372523 ATP1B4Q9UN42 357 aaPredicted RBP14.63□□□□□ -0.07
ZSWIM1-202ENST00000372523 HIRIP3Q9BW71 556 aaPredicted RBP14.61□□□□□ -0.07
ZSWIM1-202ENST00000372523 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
ZSWIM1-202ENST00000372523 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
ZSWIM1-202ENST00000372523 SIN3AQ96ST3 1273 aa14.53□□□□□ -0.08
ZSWIM1-202ENST00000372523 BCANQ96GW7 911 aa14.52□□□□□ -0.09
ZSWIM1-202ENST00000372523 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
ZSWIM1-202ENST00000372523 FAM50AQ14320 339 aaKnown RBP14.49□□□□□ -0.09
ZSWIM1-202ENST00000372523 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
ZSWIM1-202ENST00000372523 CUX1P39880 1505 aa14.47□□□□□ -0.09
ZSWIM1-202ENST00000372523 SUPT16HQ9Y5B9 1047 aaKnown RBP14.45□□□□□ -0.1
ZSWIM1-202ENST00000372523 PRXQ9BXM0 1461 aa14.45□□□□□ -0.1
ZSWIM1-202ENST00000372523 DDX10Q13206 875 aaKnown RBP14.45□□□□□ -0.1
ZSWIM1-202ENST00000372523 ARHGAP35Q9NRY4 1499 aa14.41□□□□□ -0.1
ZSWIM1-202ENST00000372523 CCNB3Q8WWL7 1395 aa14.4□□□□□ -0.1
ZSWIM1-202ENST00000372523 RAB3GAP2Q9H2M9 1393 aa14.4□□□□□ -0.1
ZSWIM1-202ENST00000372523 KIF27Q86VH2 1401 aa14.38□□□□□ -0.11
ZSWIM1-202ENST00000372523 CUX2O14529 1486 aa14.36□□□□□ -0.11
ZSWIM1-202ENST00000372523 IGF1RP08069 1367 aa14.34□□□□□ -0.11
ZSWIM1-202ENST00000372523 TRIM52Q96A61 297 aa14.33□□□□□ -0.12
ZSWIM1-202ENST00000372523 BIVM-ERCC5R4GMW8 1640 aa14.33□□□□□ -0.12
ZSWIM1-202ENST00000372523 PHLDB1Q86UU1 1377 aa14.33□□□□□ -0.12
ZSWIM1-202ENST00000372523 RRBP1Q9P2E9 1410 aaKnown RBP14.32□□□□□ -0.12
ZSWIM1-202ENST00000372523 ERICH3Q5RHP9 1530 aa14.29□□□□□ -0.12
ZSWIM1-202ENST00000372523 ARID3CA6NKF2 412 aa14.29□□□□□ -0.12
ZSWIM1-202ENST00000372523 CARMIL1Q5VZK9 1371 aa14.28□□□□□ -0.12
ZSWIM1-202ENST00000372523 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms