RNA–Protein interactions for RNA: ENST00000615849.4

PAMR1-206, Transcript of peptidase domain containing associated with muscle regeneration 1, humanhuman

TSL 2 BASIC

Gene PAMR1, Length 2,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAMR1-206ENST00000615849 NISCHQ9Y2I1 1504 aa22.55■■□□□ 1.2
PAMR1-206ENST00000615849 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
PAMR1-206ENST00000615849 CCDC180Q9P1Z9 1646 aa19.59■□□□□ 0.73
PAMR1-206ENST00000615849 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
PAMR1-206ENST00000615849 ZCCHC6Q5VYS8 1495 aaKnown RBP19.05■□□□□ 0.64
PAMR1-206ENST00000615849 DCAF8L2P0C7V8 631 aa18.99■□□□□ 0.63
PAMR1-206ENST00000615849 HRCP23327 699 aa18.96■□□□□ 0.63
PAMR1-206ENST00000615849 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
PAMR1-206ENST00000615849 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
PAMR1-206ENST00000615849 MYO15BQ96JP2 1530 aa18.91■□□□□ 0.62
PAMR1-206ENST00000615849 PPARGC1BQ86YN6 1023 aaKnown RBP18.76■□□□□ 0.59
PAMR1-206ENST00000615849 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
PAMR1-206ENST00000615849 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
PAMR1-206ENST00000615849 TRIM26Q12899 539 aaPredicted RBP18.27■□□□□ 0.52
PAMR1-206ENST00000615849 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
PAMR1-206ENST00000615849 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
PAMR1-206ENST00000615849 NACADO15069 1562 aa18.08■□□□□ 0.49
PAMR1-206ENST00000615849 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
PAMR1-206ENST00000615849 ABCC9O60706 1549 aa17.94■□□□□ 0.46
PAMR1-206ENST00000615849 ZEB1P37275 1124 aaPredicted RBP17.94■□□□□ 0.46
PAMR1-206ENST00000615849 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
PAMR1-206ENST00000615849 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
PAMR1-206ENST00000615849 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
PAMR1-206ENST00000615849 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
PAMR1-206ENST00000615849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
PAMR1-206ENST00000615849 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
PAMR1-206ENST00000615849 TTBK1Q5TCY1 1321 aaPredicted RBP17.64■□□□□ 0.41
PAMR1-206ENST00000615849 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
PAMR1-206ENST00000615849 UNC13AQ9UPW8 1703 aa17.48■□□□□ 0.39
PAMR1-206ENST00000615849 CECR2Q9BXF3 1484 aa17.48■□□□□ 0.39
PAMR1-206ENST00000615849 NEUROD1Q13562 356 aa17.48■□□□□ 0.39
PAMR1-206ENST00000615849 ACIN1Q9UKV3 1341 aaKnown RBP17.45■□□□□ 0.38
PAMR1-206ENST00000615849 BAZ1AQ9NRL2 1556 aaPredicted RBP17.41■□□□□ 0.38
PAMR1-206ENST00000615849 DIEXFQ68CQ4 756 aaKnown RBP17.41■□□□□ 0.38
PAMR1-206ENST00000615849 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
PAMR1-206ENST00000615849 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
PAMR1-206ENST00000615849 WIZO95785 1651 aa17.32■□□□□ 0.36
PAMR1-206ENST00000615849 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
PAMR1-206ENST00000615849 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
PAMR1-206ENST00000615849 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
PAMR1-206ENST00000615849 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
PAMR1-206ENST00000615849 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
PAMR1-206ENST00000615849 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
PAMR1-206ENST00000615849 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
PAMR1-206ENST00000615849 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
PAMR1-206ENST00000615849 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
PAMR1-206ENST00000615849 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
PAMR1-206ENST00000615849 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
PAMR1-206ENST00000615849 SOGA1O94964 1423 aa17.1■□□□□ 0.33
PAMR1-206ENST00000615849 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
PAMR1-206ENST00000615849 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
PAMR1-206ENST00000615849 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
PAMR1-206ENST00000615849 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.32
PAMR1-206ENST00000615849 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.31
PAMR1-206ENST00000615849 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
PAMR1-206ENST00000615849 MIER1Q8N108 512 aa17.01■□□□□ 0.31
PAMR1-206ENST00000615849 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
PAMR1-206ENST00000615849 TNIKQ9UKE5 1360 aa16.99■□□□□ 0.31
PAMR1-206ENST00000615849 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
PAMR1-206ENST00000615849 APLP2Q06481 763 aa16.87■□□□□ 0.29
PAMR1-206ENST00000615849 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
PAMR1-206ENST00000615849 ATAD2BQ9ULI0 1458 aa16.82■□□□□ 0.28
PAMR1-206ENST00000615849 MYT1Q01538 1121 aa16.8■□□□□ 0.28
PAMR1-206ENST00000615849 EEA1Q15075 1411 aa16.8■□□□□ 0.28
PAMR1-206ENST00000615849 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
PAMR1-206ENST00000615849 CLIP1P30622 1438 aa16.75■□□□□ 0.27
PAMR1-206ENST00000615849 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
PAMR1-206ENST00000615849 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
PAMR1-206ENST00000615849 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
PAMR1-206ENST00000615849 VPS8Q8N3P4 1428 aa16.64■□□□□ 0.25
PAMR1-206ENST00000615849 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
PAMR1-206ENST00000615849 ITGAEP38570 1179 aa16.6■□□□□ 0.25
PAMR1-206ENST00000615849 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
PAMR1-206ENST00000615849 SUPT16HQ9Y5B9 1047 aaKnown RBP16.55■□□□□ 0.24
PAMR1-206ENST00000615849 KANK4Q5T7N3 995 aaPredicted RBP16.54■□□□□ 0.24
PAMR1-206ENST00000615849 KIF21BO75037 1637 aa16.53■□□□□ 0.24
PAMR1-206ENST00000615849 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.23
PAMR1-206ENST00000615849 PRDM2Q13029 1718 aa16.48■□□□□ 0.23
PAMR1-206ENST00000615849 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
PAMR1-206ENST00000615849 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
PAMR1-206ENST00000615849 KCNH8Q96L42 1107 aa16.46■□□□□ 0.23
PAMR1-206ENST00000615849 BCANQ96GW7 911 aa16.44■□□□□ 0.22
PAMR1-206ENST00000615849 CLSPNQ9HAW4 1339 aa16.42■□□□□ 0.22
PAMR1-206ENST00000615849 CFTRP13569 1480 aa16.38■□□□□ 0.21
PAMR1-206ENST00000615849 TSHZ2Q9NRE2 1034 aa16.38■□□□□ 0.21
PAMR1-206ENST00000615849 ARAP1Q96P48 1450 aa16.34■□□□□ 0.21
PAMR1-206ENST00000615849 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
PAMR1-206ENST00000615849 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
PAMR1-206ENST00000615849 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
PAMR1-206ENST00000615849 FKBP8Q14318 412 aa16.29■□□□□ 0.2
PAMR1-206ENST00000615849 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
PAMR1-206ENST00000615849 ATP1B4Q9UN42 357 aaPredicted RBP16.27■□□□□ 0.2
PAMR1-206ENST00000615849 SIN3AQ96ST3 1273 aa16.27■□□□□ 0.2
PAMR1-206ENST00000615849 PRXQ9BXM0 1461 aa16.25■□□□□ 0.19
PAMR1-206ENST00000615849 FAM50AQ14320 339 aaKnown RBP16.25■□□□□ 0.19
PAMR1-206ENST00000615849 CUX1P39880 1505 aa16.25■□□□□ 0.19
PAMR1-206ENST00000615849 RAB3GAP2Q9H2M9 1393 aa16.25■□□□□ 0.19
PAMR1-206ENST00000615849 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
PAMR1-206ENST00000615849 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
PAMR1-206ENST00000615849 ANP32EQ9BTT0 268 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms