Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 CTBP1-AS2-206ENST00000581398 5652 ntBASIC17.09■□□□□ 0.33
SLF2Q8IX21 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 SCARNA12-201ENST00000459155 270 ntBASIC17.09■□□□□ 0.33
SLF2Q8IX21 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 RN7SL767P-201ENST00000493013 295 ntBASIC17.09■□□□□ 0.33
SLF2Q8IX21 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 AC005740.1-201ENST00000515639 522 ntBASIC17.09■□□□□ 0.33
SLF2Q8IX21 RNA5SP417-201ENST00000516459 108 ntBASIC17.09■□□□□ 0.33
SLF2Q8IX21 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 AC145285.5-201ENST00000562217 361 ntBASIC17.09■□□□□ 0.33
SLF2Q8IX21 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 MIR6858-201ENST00000620733 67 ntBASIC17.09■□□□□ 0.33
SLF2Q8IX21 AC009145.4-201ENST00000625119 1294 ntBASIC17.09■□□□□ 0.33
SLF2Q8IX21 SHMT1P1-201ENST00000419974 1312 ntBASIC17.09■□□□□ 0.33
SLF2Q8IX21 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SLF2Q8IX21 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLF2Q8IX21 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLF2Q8IX21 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLF2Q8IX21 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF2Q8IX21 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.08■□□□□ 0.33
SLF2Q8IX21 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.08■□□□□ 0.33
SLF2Q8IX21 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLF2Q8IX21 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLF2Q8IX21 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.08■□□□□ 0.33
SLF2Q8IX21 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLF2Q8IX21 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AL590824.1-201ENST00000403828 1349 ntBASIC17.08■□□□□ 0.32
SLF2Q8IX21 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.08■□□□□ 0.32
SLF2Q8IX21 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 USP17L6P-201ENST00000382470 1197 ntBASIC17.08■□□□□ 0.32
SLF2Q8IX21 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 GOLGA2P8-201ENST00000505201 779 ntBASIC17.08■□□□□ 0.32
SLF2Q8IX21 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 TMCO5B-205ENST00000530020 894 ntBASIC17.08■□□□□ 0.32
SLF2Q8IX21 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC17.08■□□□□ 0.32
SLF2Q8IX21 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 AC067931.2-201ENST00000623655 2003 ntBASIC17.08■□□□□ 0.32
SLF2Q8IX21 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLF2Q8IX21 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.08■□□□□ 0.32
SLF2Q8IX21 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLF2Q8IX21 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms