Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 TUBA3GP-201ENST00000410028 1325 ntBASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 RPS6-201ENST00000315377 863 ntTSL 3 BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 MESTP4-201ENST00000412333 1204 ntBASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 BX679664.3-201ENST00000414070 555 ntBASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 TMEM256P1-201ENST00000430550 340 ntBASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 AC113935.1-201ENST00000471722 555 ntBASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 RN7SL605P-201ENST00000577229 281 ntBASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 Z69706.1-201ENST00000595428 547 ntBASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 AC010776.3-201ENST00000617349 424 ntBASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.05□□□□□ -0.32
ZFHX4Q86UP3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 Z98885.3-201ENST00000624882 1757 ntBASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 AC073347.1-201ENST00000421633 2643 ntBASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 AC064801.2-201ENST00000625052 1303 ntBASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 RN7SL148P-201ENST00000467120 279 ntBASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 LINC02486-201ENST00000604157 3000 ntBASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 CCND3P1-201ENST00000438347 580 ntBASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 GRPEL2P1-201ENST00000453145 339 ntBASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.04□□□□□ -0.32
ZFHX4Q86UP3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 AC145285.1-201ENST00000469929 694 ntBASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 AC140658.4-201ENST00000561990 352 ntBASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZFHX4Q86UP3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms