Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA3P59666 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.65□□□□□ -0.38
DEFA3P59666 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.65□□□□□ -0.38
DEFA3P59666 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.65□□□□□ -0.38
DEFA3P59666 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
DEFA3P59666 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.65□□□□□ -0.39
DEFA3P59666 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
DEFA3P59666 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
DEFA3P59666 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.64□□□□□ -0.39
DEFA3P59666 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
DEFA3P59666 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA3P59666 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.64□□□□□ -0.39
DEFA3P59666 USP17L6P-201ENST00000382470 1197 ntBASIC12.64□□□□□ -0.39
DEFA3P59666 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.64□□□□□ -0.39
DEFA3P59666 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.64□□□□□ -0.39
DEFA3P59666 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA3P59666 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 AL121956.5-201ENST00000625261 221 ntBASIC12.64□□□□□ -0.39
DEFA3P59666 AC026992.2-203ENST00000563004 2419 ntBASIC12.64□□□□□ -0.39
DEFA3P59666 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA3P59666 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA3P59666 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA3P59666 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA3P59666 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA3P59666 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA3P59666 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
DEFA3P59666 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 AC073335.2-201ENST00000610177 3441 ntBASIC12.63□□□□□ -0.39
DEFA3P59666 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA3P59666 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.63□□□□□ -0.39
DEFA3P59666 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.63□□□□□ -0.39
DEFA3P59666 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.63□□□□□ -0.39
DEFA3P59666 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.63□□□□□ -0.39
DEFA3P59666 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.63□□□□□ -0.39
DEFA3P59666 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 SORD2P-201ENST00000558556 1069 ntBASIC12.63□□□□□ -0.39
DEFA3P59666 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 AC004840.1-201ENST00000636359 365 ntBASIC12.63□□□□□ -0.39
DEFA3P59666 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.63□□□□□ -0.39
DEFA3P59666 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms