Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ODF2-210ENST00000444119 2418 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 RNLS-202ENST00000371947 3385 ntTSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 AL360004.1-201ENST00000358748 3258 ntTSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 PAK6-213ENST00000560346 4020 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 CALM3-202ENST00000391918 702 ntTSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 ABI1-204ENST00000376138 3503 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 DLAT-202ENST00000393051 3517 ntTSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC9.3□□□□□ -0.92
PCP4P48539 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 TSNAX-DISC1-205ENST00000602962 3557 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 SSRP1-201ENST00000278412 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 CETN4P-206ENST00000642099 2168 ntBASIC9.3□□□□□ -0.92
PCP4P48539 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 CAMK2G-203ENST00000322680 3818 ntTSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 CD36-208ENST00000433696 1985 ntTSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 WDR1-204ENST00000499869 3054 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
PCP4P48539 RBM26-201ENST00000267229 3624 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 SGK3-202ENST00000396596 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PCP4P48539 KIAA1683-207ENST00000600359 3871 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
PCP4P48539 CD83-202ENST00000612003 2307 ntTSL 4 BASIC9.3□□□□□ -0.92
PCP4P48539 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 LRRTM4-202ENST00000409093 2247 ntAPPRIS P3 TSL 2 BASIC9.29□□□□□ -0.92
PCP4P48539 KBTBD3-205ENST00000531837 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 BCAS1-201ENST00000371435 3020 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC9.29□□□□□ -0.92
PCP4P48539 SUPT5H-213ENST00000598725 3742 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
PCP4P48539 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC9.29□□□□□ -0.92
PCP4P48539 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
PCP4P48539 DNASE1L3-206ENST00000483681 2099 ntTSL 5 BASIC9.29□□□□□ -0.92
PCP4P48539 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC9.29□□□□□ -0.92
PCP4P48539 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC9.29□□□□□ -0.92
PCP4P48539 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC9.29□□□□□ -0.92
PCP4P48539 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 AC013467.2-201ENST00000605472 835 ntBASIC9.29□□□□□ -0.92
PCP4P48539 AC010654.1-201ENST00000615722 808 ntBASIC9.29□□□□□ -0.92
PCP4P48539 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
PCP4P48539 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 CAPRIN2-201ENST00000298892 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 PALM2-202ENST00000374531 4492 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.29□□□□□ -0.92
PCP4P48539 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC9.29□□□□□ -0.92
PCP4P48539 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PCP4P48539 LINC00563-201ENST00000566370 1400 ntBASIC9.29□□□□□ -0.92
PCP4P48539 AC091167.3-201ENST00000561573 3838 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
PCP4P48539 AC010867.1-201ENST00000558038 2289 ntBASIC9.29□□□□□ -0.92
PCP4P48539 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC9.28□□□□□ -0.92
PCP4P48539 NLRP12-202ENST00000345770 3547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 SYNE1-237ENST00000539504 3768 ntTSL 5 BASIC9.28□□□□□ -0.92
PCP4P48539 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC9.28□□□□□ -0.92
PCP4P48539 DDX11L9-201ENST00000559159 1488 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 LINC01163-202ENST00000630252 3086 ntTSL 2 BASIC9.28□□□□□ -0.92
PCP4P48539 LAMA4-205ENST00000389463 6297 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 CKMT2-AS1-201ENST00000500148 2224 ntTSL 2 BASIC9.28□□□□□ -0.92
PCP4P48539 ODF2-203ENST00000372807 2475 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 DDX19A-201ENST00000302243 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC9.28□□□□□ -0.92
PCP4P48539 TSPAN1-201ENST00000372003 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC9.28□□□□□ -0.92
PCP4P48539 HHAT-209ENST00000545781 2864 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC9.28□□□□□ -0.92
PCP4P48539 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
PCP4P48539 MEI1-201ENST00000401548 4020 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 CYP4A11-202ENST00000371904 1760 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
PCP4P48539 CYP4A22-207ENST00000620131 1760 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
PCP4P48539 CYP11B1-201ENST00000292427 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
PCP4P48539 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 CLU-201ENST00000316403 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCP4P48539 MED8-203ENST00000372457 1924 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms