RNA–Protein interactions for RNA: ENST00000630252.1

LINC01163-202, Transcript of long intergenic non-protein coding RNA 1163, humanhuman

TSL 2 BASIC

Gene LINC01163, Length 3,086 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01163-202ENST00000630252 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
LINC01163-202ENST00000630252 HRCP23327 699 aa17.7■□□□□ 0.42
LINC01163-202ENST00000630252 CCDC180Q9P1Z9 1646 aa17.45■□□□□ 0.38
LINC01163-202ENST00000630252 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
LINC01163-202ENST00000630252 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
LINC01163-202ENST00000630252 ABCC9O60706 1549 aa17.37■□□□□ 0.37
LINC01163-202ENST00000630252 PCGF6Q9BYE7 350 aa17.3■□□□□ 0.36
LINC01163-202ENST00000630252 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
LINC01163-202ENST00000630252 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
LINC01163-202ENST00000630252 MYO15BQ96JP2 1530 aa17.17■□□□□ 0.34
LINC01163-202ENST00000630252 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
LINC01163-202ENST00000630252 DCAF1Q9Y4B6 1507 aa16.97■□□□□ 0.31
LINC01163-202ENST00000630252 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
LINC01163-202ENST00000630252 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
LINC01163-202ENST00000630252 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
LINC01163-202ENST00000630252 ZEB1P37275 1124 aaPredicted RBP16.78■□□□□ 0.28
LINC01163-202ENST00000630252 LOC105371045A0A1W2PR82 267 aa16.7■□□□□ 0.26
LINC01163-202ENST00000630252 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
LINC01163-202ENST00000630252 RB1CC1Q8TDY2 1594 aa16.65■□□□□ 0.26
LINC01163-202ENST00000630252 MYT1Q01538 1121 aa16.59■□□□□ 0.25
LINC01163-202ENST00000630252 NACADO15069 1562 aa16.51■□□□□ 0.23
LINC01163-202ENST00000630252 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
LINC01163-202ENST00000630252 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
LINC01163-202ENST00000630252 NEUROD1Q13562 356 aa16.23■□□□□ 0.19
LINC01163-202ENST00000630252 CENPBP07199 599 aaPredicted RBP16.22■□□□□ 0.19
LINC01163-202ENST00000630252 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
LINC01163-202ENST00000630252 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
LINC01163-202ENST00000630252 UNC13AQ9UPW8 1703 aa16.17■□□□□ 0.18
LINC01163-202ENST00000630252 BICRAQ9NZM4 1560 aa16.08■□□□□ 0.17
LINC01163-202ENST00000630252 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.16
LINC01163-202ENST00000630252 CCER1Q8TC90 406 aaPredicted RBP16.06■□□□□ 0.16
LINC01163-202ENST00000630252 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
LINC01163-202ENST00000630252 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
LINC01163-202ENST00000630252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.15
LINC01163-202ENST00000630252 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
LINC01163-202ENST00000630252 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
LINC01163-202ENST00000630252 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
LINC01163-202ENST00000630252 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
LINC01163-202ENST00000630252 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
LINC01163-202ENST00000630252 YTHDC1Q96MU7 727 aaKnown RBP15.73■□□□□ 0.11
LINC01163-202ENST00000630252 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
LINC01163-202ENST00000630252 SCRIBQ14160 1630 aa15.67■□□□□ 0.1
LINC01163-202ENST00000630252 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
LINC01163-202ENST00000630252 MIER1Q8N108 512 aa15.61■□□□□ 0.09
LINC01163-202ENST00000630252 TTBK1Q5TCY1 1321 aaPredicted RBP15.57■□□□□ 0.08
LINC01163-202ENST00000630252 PRKCSHP14314 528 aaPredicted RBP15.57■□□□□ 0.08
LINC01163-202ENST00000630252 CLSPNQ9HAW4 1339 aa15.56■□□□□ 0.08
LINC01163-202ENST00000630252 CEP162Q5TB80 1403 aa15.49■□□□□ 0.07
LINC01163-202ENST00000630252 TNIKQ9UKE5 1360 aa15.44■□□□□ 0.06
LINC01163-202ENST00000630252 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
LINC01163-202ENST00000630252 ANP32EQ9BTT0 268 aa15.41■□□□□ 0.06
LINC01163-202ENST00000630252 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
LINC01163-202ENST00000630252 DNAJC5Q9H3Z4 198 aa15.36■□□□□ 0.05
LINC01163-202ENST00000630252 WIZO95785 1651 aa15.35■□□□□ 0.05
LINC01163-202ENST00000630252 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
LINC01163-202ENST00000630252 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
LINC01163-202ENST00000630252 TSHZ2Q9NRE2 1034 aa15.32■□□□□ 0.04
LINC01163-202ENST00000630252 BCL11AQ9H165 835 aa15.32■□□□□ 0.04
LINC01163-202ENST00000630252 CCDC88BA6NC98 1476 aa15.31■□□□□ 0.04
LINC01163-202ENST00000630252 EEA1Q15075 1411 aa15.31■□□□□ 0.04
LINC01163-202ENST00000630252 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
LINC01163-202ENST00000630252 BAZ1AQ9NRL2 1556 aaPredicted RBP15.3■□□□□ 0.04
LINC01163-202ENST00000630252 CUX2O14529 1486 aa15.28■□□□□ 0.04
LINC01163-202ENST00000630252 SOGA1O94964 1423 aa15.26■□□□□ 0.03
LINC01163-202ENST00000630252 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
LINC01163-202ENST00000630252 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
LINC01163-202ENST00000630252 SLC24A1O60721 1099 aa15.2■□□□□ 0.02
LINC01163-202ENST00000630252 NCAPD3P42695 1498 aa15.19■□□□□ 0.02
LINC01163-202ENST00000630252 APLP2Q06481 763 aa15.18■□□□□ 0.02
LINC01163-202ENST00000630252 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
LINC01163-202ENST00000630252 TOP2AP11388 1531 aaKnown RBP15.11■□□□□ 0.01
LINC01163-202ENST00000630252 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
LINC01163-202ENST00000630252 CLIP1P30622 1438 aa15.09■□□□□ 0.01
LINC01163-202ENST00000630252 VPS8Q8N3P4 1428 aa15.09■□□□□ 0.01
LINC01163-202ENST00000630252 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
LINC01163-202ENST00000630252 ERCC6Q03468 1493 aa15.09■□□□□ 0.01
LINC01163-202ENST00000630252 CEP164Q9UPV0 1460 aa15.08■□□□□ 0
LINC01163-202ENST00000630252 DHX57Q6P158 1386 aaKnown RBP15.07■□□□□ 0
LINC01163-202ENST00000630252 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
LINC01163-202ENST00000630252 BCANQ96GW7 911 aa15.02□□□□□ -0.01
LINC01163-202ENST00000630252 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
LINC01163-202ENST00000630252 FKBP8Q14318 412 aa15.01□□□□□ -0.01
LINC01163-202ENST00000630252 KIF21BO75037 1637 aa15□□□□□ -0.01
LINC01163-202ENST00000630252 RBM19Q9Y4C8 960 aaKnown RBP15□□□□□ -0.01
LINC01163-202ENST00000630252 ERICH6Q7L0X2 663 aa14.99□□□□□ -0.01
LINC01163-202ENST00000630252 NEFLP07196 543 aa14.98□□□□□ -0.01
LINC01163-202ENST00000630252 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
LINC01163-202ENST00000630252 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
LINC01163-202ENST00000630252 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
LINC01163-202ENST00000630252 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
LINC01163-202ENST00000630252 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
LINC01163-202ENST00000630252 RANGAP1P46060 587 aaPredicted RBP14.86□□□□□ -0.03
LINC01163-202ENST00000630252 RAPGEF2Q9Y4G8 1499 aa14.85□□□□□ -0.03
LINC01163-202ENST00000630252 NESP48681 1621 aa14.84□□□□□ -0.03
LINC01163-202ENST00000630252 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
LINC01163-202ENST00000630252 DDX10Q13206 875 aaKnown RBP14.81□□□□□ -0.04
LINC01163-202ENST00000630252 ITGAEP38570 1179 aa14.8□□□□□ -0.04
LINC01163-202ENST00000630252 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
LINC01163-202ENST00000630252 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
LINC01163-202ENST00000630252 FANCIQ9NVI1 1328 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms